Os03g0223900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-3-0-acyl N-acetylglucosamine deacetylase family protein.
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Os03g0223900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-3-0-acyl N-acetylglucosamine deacetylase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.31 | 0.391 | 6.98 | 0.936 | 0.989 | 0.849 | -0.00335 | -0.336 | 0.615 | 20.7 | 11.16 | 57 | -- | -- |
| 69.6 | 0.389 | 6.98 | 0.928 | 0.998 | 0.843 | -0.304 | -- | 0.613 | 20.7 | 10.7 | 60 | -- | -- |
| 69.31 | 0.388 | 6.98 | 0.935 | 0.994 | 0.85 | -- | -0.329 | 0.614 | 20.7 | 11 | 60 | -- | -- |
| 69.9 | 0.389 | 6.98 | 0.931 | 0.993 | 0.84 | -- | -- | 0.613 | 20.7 | 10.01 | 60 | -- | -- |
| 92.5 | 0.45 | 6.96 | 0.941 | -- | 1.3 | -- | -0.406 | 0.588 | -- | 6.821 | 13 | -- | -- |
| 80.9 | 0.422 | 7.01 | 0.94 | 1.72 | -- | -0.227 | -- | 0.554 | 22.4 | -- | -- | -- | -- |
| 81.1 | 0.422 | 7.01 | 0.949 | 1.72 | -- | -- | -- | 0.555 | 22.4 | -- | -- | -- | -- |
| 92.7 | 0.45 | 6.96 | 0.952 | -- | 1.3 | -- | -- | 0.595 | -- | 6.299 | 11 | -- | -- |
| 92.73 | 0.449 | 7 | -- | 0.949 | 0.916 | -- | -- | 0.52 | 20.4 | 10 | 60 | -- | -- |
| 262.88 | 0.758 | 6.96 | 0.978 | -- | -- | -- | -- | 0.561 | -- | -- | -- | -- | -- |
| 104.83 | 0.479 | 7.03 | -- | 1.73 | -- | -- | -- | 0.449 | 22.5 | -- | -- | -- | -- |
| 116.59 | 0.505 | 6.98 | -- | -- | 1.3 | -- | -- | 0.49 | -- | 6.299 | 11 | -- | -- |
| 288.1 | 0.792 | 6.99 | -- | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.92 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 65.62 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 66.09 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 4 | 66.47 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 8 | 66.55 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 11 | 66.57 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 13 | 66.59 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 20 |
| 23 | 66.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 32 | 66.84 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 34 | 66.86 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 41 | 66.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 54 | 67.04 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 59 | 67.07 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 71 | 67.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 90 | 67.12 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 99 | 67.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 101 | 67.21 | atmosphere | 995.0 | 43200 | < th | dose dependent | no | NA | NA |
| 102 | 67.21 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 22 |
| 108 | 67.22 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 114 | 67.23 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 143 | 67.32 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 23 |
| 145 | 67.33 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 8 | 5 |
| 157 | 67.37 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 5 |
| 169 | 67.40 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 189 | 67.45 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 202 | 67.47 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 17 | NA |
| 280 | 67.64 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 300 | 67.65 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 306 | 67.66 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 345 | 67.72 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 18 |
| 369 | 67.76 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 372 | 67.77 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 373 | 67.77 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 392 | 67.80 | wind | 5.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 413 | 67.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 427 | 67.83 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 437 | 67.84 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 462 | 67.87 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 482 | 67.89 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 500 | 67.91 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 501 | 67.91 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 502 | 67.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 504 | 67.91 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 505 | 67.91 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 513 | 67.92 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 516 | 67.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 525 | 67.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 546 | 67.95 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 549 | 67.95 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 564 | 67.96 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 588 | 67.98 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 593 | 67.98 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 7 |
| 666 | 68.04 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 671 | 68.04 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 677 | 68.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 678 | 68.05 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 685 | 68.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 686 | 68.05 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 732 | 68.08 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 735 | 68.08 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 23 | 9 |
| 742 | 68.08 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 748 | 68.09 | wind | 5.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 749 | 68.09 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 750 | 68.09 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 767 | 68.10 | wind | 5.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 769 | 68.10 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 813 | 68.13 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 832 | 68.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 850 | 68.15 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 859 | 68.16 | wind | 5.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 870 | 68.16 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 892 | 68.18 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 898 | 68.18 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 907 | 68.19 | wind | 5.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 915 | 68.19 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 941 | 68.20 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 950 | 68.21 | wind | 3.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 997 | 68.24 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |