Os03g0214200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1675 family protein.
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Os03g0214200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1675 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.91 | 0.474 | 10.2 | 2.53 | 2.06 | 1.09 | 1.03 | 4.15 | 0.484 | 6.56 | 1.431 | 5815 | -- | -- |
| 124.39 | 0.519 | 10.2 | 2.36 | 2.21 | 0.922 | 1.24 | -- | 0.421 | 6.63 | 8.398 | 10666 | -- | -- |
| 104.24 | 0.476 | 10.2 | 2.52 | 2.07 | 1.17 | -- | 4.3 | 0.483 | 6.47 | 1.252 | 5821 | -- | -- |
| 122.73 | 0.516 | 10.2 | 1.92 | 2.23 | 0.601 | -- | -- | 0.424 | 6.44 | 3.68 | 10570 | -- | -- |
| 327.82 | 0.843 | 10.2 | 2.56 | -- | 1.33 | -- | 4.4 | 0.484 | -- | 1.233 | 5804 | -- | -- |
| 129.56 | 0.534 | 10.2 | 1.83 | 2.09 | -- | 1.18 | -- | 0.495 | 6.62 | -- | -- | -- | -- |
| 133.01 | 0.54 | 10.2 | 1.85 | 2.1 | -- | -- | -- | 0.491 | 6.56 | -- | -- | -- | -- |
| 344.4 | 0.868 | 10.3 | 1.9 | -- | 0.4 | -- | -- | 0.523 | -- | 1.233 | 5804 | -- | -- |
| 132.3 | 0.536 | 10.3 | -- | 2.34 | 1.22 | -- | -- | 0.131 | 6.83 | 0.009969 | 47520 | -- | -- |
| 362.45 | 0.89 | 10.3 | 1.9 | -- | -- | -- | -- | 0.534 | -- | -- | -- | -- | -- |
| 223.18 | 0.699 | 10.3 | -- | 2.12 | -- | -- | -- | 0.285 | 6.51 | -- | -- | -- | -- |
| 350.2 | 0.872 | 10.3 | -- | -- | 1.6 | -- | -- | -0.0652 | -- | 3.234e-09 | 47520 | -- | -- |
| 457.77 | 0.999 | 10.3 | -- | -- | -- | -- | -- | 0.324 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.36 | temperature | 25 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 5 | 100.48 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 12 | 100.60 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 19 | 100.83 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 26 | 100.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 32 | 100.99 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 56 | 101.28 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 62 | 101.31 | temperature | 25 | 14400 | > th | dose independent | rect. | 1 | 12 |
| 64 | 101.36 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 71 | 101.38 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 94 | 101.50 | temperature | 25 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 100 | 101.53 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 124 | 101.59 | temperature | 25 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 133 | 101.62 | temperature | 25 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 134 | 101.62 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 148 | 101.63 | temperature | 25 | 14400 | < th | dose independent | rect. | 3 | 9 |
| 213 | 101.80 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 231 | 101.85 | temperature | 25 | 14400 | > th | dose dependent | sin | 1 | NA |
| 271 | 101.93 | temperature | 25 | 14400 | > th | dose independent | sin | 5 | NA |
| 355 | 102.09 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 363 | 102.10 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 380 | 102.14 | temperature | 25 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 383 | 102.14 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 406 | 102.18 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 412 | 102.19 | temperature | 25 | 14400 | < th | dose independent | sin | 5 | NA |
| 421 | 102.19 | temperature | 25 | 14400 | > th | dose dependent | rect. | 10 | 17 |
| 444 | 102.21 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 464 | 102.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 20 |
| 501 | 102.27 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 514 | 102.29 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 530 | 102.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 534 | 102.32 | wind | 5 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 566 | 102.36 | radiation | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 636 | 102.40 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 23 |
| 654 | 102.43 | temperature | 30 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 665 | 102.44 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 10 |
| 676 | 102.45 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 740 | 102.50 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 745 | 102.50 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 867 | 102.60 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 21 |
| 871 | 102.61 | temperature | 30 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 904 | 102.65 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 949 | 102.69 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |