Os03g0202200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Porin-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0202200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Porin-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.22 | 0.201 | 11.7 | -0.24 | 0.839 | -0.641 | 0.0775 | 0.986 | -0.0588 | 5.64 | 24.87 | 10 | -- | -- |
| 18.58 | 0.202 | 11.7 | -0.356 | 0.85 | -0.564 | -0.0264 | -- | -0.0923 | 5.6 | 24.87 | 10 | -- | -- |
| 18.19 | 0.2 | 11.7 | -0.248 | 0.842 | -0.645 | -- | 0.927 | -0.0616 | 5.66 | 24.87 | 10 | -- | -- |
| 18.58 | 0.202 | 11.7 | -0.356 | 0.85 | -0.563 | -- | -- | -0.0923 | 5.6 | 24.87 | 10 | -- | -- |
| 41.68 | 0.301 | 11.7 | 0.0438 | -- | -1.28 | -- | 1.91 | 0.074 | -- | 24.2 | 174 | -- | -- |
| 23.28 | 0.226 | 11.7 | -0.441 | 1.02 | -- | 0.167 | -- | -0.141 | 5.06 | -- | -- | -- | -- |
| 23.35 | 0.226 | 11.7 | -0.441 | 1.02 | -- | -- | -- | -0.142 | 5.06 | -- | -- | -- | -- |
| 43.08 | 0.306 | 11.7 | -0.224 | -- | -1.13 | -- | -- | -0.00212 | -- | 24.2 | 174 | -- | -- |
| 21.7 | 0.217 | 11.7 | -- | 0.828 | -0.628 | -- | -- | -0.0139 | 5.69 | 23.96 | 14 | -- | -- |
| 78.19 | 0.413 | 11.7 | -0.404 | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
| 28.48 | 0.25 | 11.7 | -- | 1.01 | -- | -- | -- | -0.0928 | 5.08 | -- | -- | -- | -- |
| 44.37 | 0.31 | 11.7 | -- | -- | -1.17 | -- | -- | 0.0233 | -- | 24.19 | 174 | -- | -- |
| 82.51 | 0.424 | 11.7 | -- | -- | -- | -- | -- | -0.071 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 5 | 14.41 | temperature | 20 | 90 | > th | dose dependent | sin | 3 | NA |
| 10 | 14.57 | temperature | 30 | 90 | < th | dose dependent | sin | 2 | NA |
| 69 | 15.33 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 14 |
| 75 | 15.38 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 117 | 15.75 | temperature | 25 | 270 | > th | dose independent | sin | 4 | NA |
| 139 | 15.85 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 7 |
| 150 | 15.93 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 12 |
| 167 | 16.00 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 13 |
| 168 | 16.01 | temperature | 25 | 270 | < th | dose independent | sin | 4 | NA |
| 188 | 16.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 201 | 16.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 12 |
| 202 | 16.13 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 9 |
| 307 | 16.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 345 | 16.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 468 | 16.86 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 546 | 17.02 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 578 | 17.06 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 817 | 17.31 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 19 |