Os03g0200200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0200200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 261.26 | 0.759 | 6.9 | -0.542 | 1.2 | -2.74 | -0.872 | -7.87 | 0.558 | 1.04 | 1.554 | 18955 | -- | -- |
| 340.81 | 0.86 | 6.68 | 0.51 | 1.1 | -2.04 | -1.19 | -- | 0.84 | 1.27 | 20.03 | 13278 | -- | -- |
| 263.22 | 0.756 | 6.9 | -0.541 | 1.34 | -2.74 | -- | -7.76 | 0.569 | 1.32 | 1.502 | 18845 | -- | -- |
| 326.97 | 0.842 | 6.68 | 0.88 | 1.36 | -2.09 | -- | -- | 0.845 | 1 | 20.02 | 13286 | -- | -- |
| 342.9 | 0.862 | 6.84 | -0.521 | -- | -2.73 | -- | -7.74 | 0.628 | -- | 1.77 | 19110 | -- | -- |
| 486.28 | 1.03 | 6.85 | 0.601 | 1.38 | -- | -0.223 | -- | 0.174 | 1.1 | -- | -- | -- | -- |
| 486.49 | 1.03 | 6.85 | 0.609 | 1.38 | -- | -- | -- | 0.175 | 1.12 | -- | -- | -- | -- |
| 421.16 | 0.956 | 6.61 | 0.437 | -- | -2.56 | -- | -- | 0.883 | -- | 3.49 | 13360 | -- | -- |
| 344.08 | 0.864 | 6.7 | -- | 1.45 | -2.1 | -- | -- | 0.83 | 1.02 | 21.87 | 14657 | -- | -- |
| 604.98 | 1.15 | 6.83 | 0.661 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 496.25 | 1.04 | 6.87 | -- | 1.39 | -- | -- | -- | 0.107 | 1.13 | -- | -- | -- | -- |
| 434.29 | 0.971 | 6.61 | -- | -- | -2.36 | -- | -- | 0.964 | -- | 3.49 | 13348 | -- | -- |
| 616.52 | 1.16 | 6.85 | -- | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 255.42 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 2 | 255.58 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 4 | 256.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 5 | 256.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 6 | 256.12 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 11 | 256.57 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 14 | 256.77 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 6 |
| 21 | 257.59 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 27 | 258.38 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 10 |
| 28 | 258.39 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 40 | 259.08 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 49 | 259.50 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 73 | 260.49 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 85 | 260.87 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 91 | 261.03 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 97 | 261.13 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 110 | 261.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 111 | 261.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 16 |
| 112 | 261.30 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 120 | 261.34 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 138 | 261.50 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 2 | 16 |
| 143 | 261.56 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 6 | 12 |
| 171 | 261.88 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 6 | 12 |
| 178 | 261.95 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 192 | 262.04 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 194 | 262.06 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 227 | 262.28 | temperature | 25.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 314 | 262.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 10 |
| 333 | 262.73 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 345 | 262.81 | temperature | 25.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 353 | 262.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 354 | 262.83 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 355 | 262.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 388 | 262.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 482 | 263.21 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 502 | 263.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 505 | 263.31 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 636 | 263.73 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 15 |
| 656 | 263.79 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 663 | 263.83 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 712 | 263.96 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 717 | 263.98 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 774 | 264.11 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 810 | 264.21 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 7 | 21 |
| 922 | 264.46 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 949 | 264.51 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |