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Os03g0187400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Zinc finger, FYVE/PHD-type domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0218) R2 : 0.386
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.35 (0.0804) R2dE : 0.404 R2E : 0.326
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.268 (0.047) R2dN8 : 0.0599 R2N8 : -0.0182
σ : 0.408
deviance : 76.61
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C
peak time of C : --
E
wheather : temperature
threshold : 21.08
memory length : 80
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.31 0.391 10.4 -0.701 0.221 -1.05 -0.998 -2 0.093 4.68 20.21 71 -- --
71.48 0.394 10.3 -0.374 0.258 -1.14 -0.127 -- 0.188 5.84 20.93 60 -- --
70.03 0.39 10.4 -0.522 0.263 -1.16 -- -1.18 0.161 6.76 20.3 50 -- --
71.18 0.393 10.3 -0.331 0.25 -1.21 -- -- 0.208 7.4 20.89 60 -- --
73.2 0.398 10.4 -0.509 -- -1.22 -- -1.09 0.174 -- 20.51 71 -- --
95.19 0.457 10.4 -0.6 0.615 -- -0.108 -- 0.000861 4.43 -- -- -- --
95.22 0.457 10.4 -0.599 0.615 -- -- -- 0.00144 4.44 -- -- -- --
74.1 0.401 10.3 -0.316 -- -1.28 -- -- 0.223 -- 21.24 80 -- --
73.85 0.4 10.3 -- 0.25 -1.36 -- -- 0.266 8.13 20.46 50 -- --
115.45 0.502 10.4 -0.575 -- -- -- -- 0.0177 -- -- -- -- --
104.69 0.479 10.4 -- 0.603 -- -- -- 0.0682 4.46 -- -- -- --
76.61 0.408 10.3 -- -- -1.35 -- -- 0.268 -- 21.08 80 -- --
124.19 0.52 10.4 -- -- -- -- -- 0.0815 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.28 temperature 30 90 < th dose dependent rect. 1 22
2 64.29 temperature 25 90 < th dose independent rect. 17 4
3 64.48 temperature 30 90 < th dose dependent rect. 23 23
4 64.83 temperature 25 90 < th dose independent rect. 15 6
6 65.37 temperature 20 90 > th dose dependent rect. 7 20
11 65.96 temperature 25 90 < th dose independent rect. 13 8
15 66.14 temperature 25 10 < th dose independent rect. 16 5
22 66.60 temperature 30 90 < th dose dependent rect. 13 8
32 66.79 temperature 30 90 < th dose dependent rect. 11 10
53 67.29 temperature 30 90 < th dose dependent rect. 15 6
55 67.32 temperature 25 10 < th dose dependent sin 21 NA
58 67.50 temperature 25 10 < th dose independent rect. 12 9
59 67.61 temperature 25 10 < th dose independent rect. 14 7
63 67.69 temperature 30 90 < th dose dependent rect. 3 20
74 67.97 temperature 25 10 < th dose dependent rect. 10 11
87 68.18 temperature 30 10 < th dose dependent rect. 12 9
95 68.27 temperature 30 90 < th dose dependent rect. 3 18
102 68.39 temperature 25 10 < th dose dependent rect. 8 13
104 68.48 temperature 30 270 < th dose dependent rect. 17 1
118 68.64 temperature 10 90 > th dose dependent rect. 20 23
132 68.77 temperature 30 10 < th dose dependent rect. 1 23
159 69.09 temperature 20 90 > th dose dependent rect. 13 23
172 69.25 temperature 30 90 < th dose dependent rect. 5 16
177 69.36 temperature 25 10 < th dose dependent rect. 16 5
206 69.59 temperature 20 90 > th dose dependent no NA NA
222 69.72 temperature 30 90 < th dose dependent rect. 11 22
234 69.79 temperature 25 10 < th dose dependent rect. 6 15
257 70.01 temperature 30 90 < th dose dependent rect. 21 23
261 70.08 temperature 30 90 < th dose dependent rect. 15 23
267 70.13 temperature 25 270 < th dose independent rect. 17 1
278 70.18 temperature 30 90 < th dose dependent rect. 13 22
279 70.18 temperature 30 30 < th dose dependent rect. 19 23
283 70.23 temperature 10 90 > th dose dependent no NA NA
285 70.23 temperature 30 90 < th dose dependent no NA NA
341 70.72 temperature 25 30 < th dose independent sin 19 NA
342 70.72 temperature 30 90 < th dose dependent rect. 16 17
345 70.73 temperature 25 30 > th dose independent sin 19 NA
351 70.74 temperature 20 90 > th dose dependent rect. 15 23
368 70.84 temperature 30 30 < th dose dependent rect. 3 23
383 70.94 temperature 30 90 < th dose dependent rect. 15 20
385 70.96 temperature 25 90 > th dose independent rect. 8 19
419 71.08 temperature 30 90 < th dose dependent rect. 13 20
429 71.11 temperature 30 30 < th dose dependent rect. 9 23
480 71.31 temperature 20 10 > th dose dependent sin 19 NA
500 71.42 radiation 1 270 < th dose independent rect. 17 1
538 71.55 temperature 10 270 > th dose dependent rect. 17 23
545 71.58 temperature 20 30 > th dose dependent rect. 23 23
579 71.72 temperature 30 10 < th dose dependent rect. 12 20
680 72.10 temperature 20 30 > th dose dependent rect. 11 23
715 72.24 temperature 25 90 < th dose independent rect. 5 16
739 72.33 temperature 25 90 < th dose independent rect. 1 22
742 72.34 temperature 25 90 > th dose independent rect. 7 23
816 72.61 temperature 25 90 < th dose independent rect. 23 23
879 72.88 temperature 25 90 < th dose independent rect. 11 22