Os03g0186500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myoactive tetradecapeptides family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0186500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Myoactive tetradecapeptides family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.7 | 0.3 | 12.9 | 1.45 | 0.462 | 0.357 | -0.389 | -1.21 | 0.348 | 3.91 | 90.08 | 4274 | -- | -- |
| 42.16 | 0.302 | 12.9 | 1.3 | 0.443 | 0.391 | -0.398 | -- | 0.361 | 3.57 | 90 | 4793 | -- | -- |
| 41.1 | 0.299 | 12.9 | 1.46 | 0.451 | 0.339 | -- | -1.19 | 0.349 | 3.91 | 90.01 | 4442 | -- | -- |
| 42.62 | 0.304 | 12.9 | 1.3 | 0.493 | 0.383 | -- | -- | 0.338 | 3.74 | 89 | 5604 | -- | -- |
| 51.94 | 0.336 | 12.9 | 1.45 | -- | 0.421 | -- | -0.963 | 0.404 | -- | 90 | 4686 | -- | -- |
| 43.83 | 0.31 | 12.9 | 1.36 | 0.472 | -- | -0.405 | -- | 0.197 | 3.95 | -- | -- | -- | -- |
| 44.31 | 0.312 | 12.9 | 1.36 | 0.47 | -- | -- | -- | 0.199 | 3.94 | -- | -- | -- | -- |
| 52.42 | 0.339 | 12.9 | 1.34 | -- | 0.214 | -- | -- | 0.268 | -- | 90 | 4686 | -- | -- |
| 84.01 | 0.427 | 12.9 | -- | 0.508 | 0.774 | -- | -- | 0.377 | 3.84 | 87 | 5665 | -- | -- |
| 56.4 | 0.351 | 12.9 | 1.38 | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
| 93.4 | 0.452 | 12.9 | -- | 0.496 | -- | -- | -- | 0.0473 | 3.9 | -- | -- | -- | -- |
| 95.08 | 0.454 | 12.9 | -- | -- | 0.651 | -- | -- | 0.332 | -- | 87 | 4713 | -- | -- |
| 106.93 | 0.483 | 12.9 | -- | -- | -- | -- | -- | 0.0582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.43 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 13 | 16 |
| 25 | 38.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 9 |
| 26 | 38.26 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 15 |
| 30 | 38.51 | radiation | 20.0 | 10 | < th | dose independent | rect. | 1 | 15 |
| 31 | 38.53 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 34 | 38.59 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 16 |
| 35 | 38.59 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 16 |
| 37 | 38.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 8 |
| 38 | 38.64 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 39 | 38.66 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 8 |
| 40 | 38.66 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 8 |
| 41 | 38.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 43 | 38.67 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 44 | 38.67 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 45 | 38.67 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 16 |
| 47 | 38.68 | wind | 1.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 62 | 38.87 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 8 |
| 65 | 38.87 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 17 |
| 67 | 38.88 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 69 | 38.88 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 77 | 38.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 78 | 38.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 86 | 38.97 | wind | 1.0 | 30 | > th | dose independent | rect. | 16 | 21 |
| 93 | 38.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 8 |
| 95 | 38.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 16 |
| 103 | 39.02 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 117 | 39.06 | humidity | 50.0 | 10 | > th | dose independent | rect. | 13 | 16 |
| 118 | 39.06 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 13 | 16 |
| 123 | 39.06 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 13 |
| 126 | 39.08 | radiation | 20.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 131 | 39.09 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 7 |
| 141 | 39.12 | wind | 9.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 145 | 39.13 | humidity | 50.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 150 | 39.14 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 8 |
| 167 | 39.16 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 196 | 39.21 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 15 |
| 199 | 39.22 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 205 | 39.23 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 13 | 16 |
| 206 | 39.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 18 | 18 |
| 217 | 39.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 18 | 18 |
| 223 | 39.24 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 233 | 39.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 17 |
| 248 | 39.26 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 250 | 39.27 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 251 | 39.27 | radiation | 40.0 | 90 | < th | dose independent | rect. | 12 | 16 |
| 258 | 39.27 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 280 | 39.31 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 289 | 39.32 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 292 | 39.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 293 | 39.32 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 306 | 39.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 309 | 39.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 6 |
| 311 | 39.34 | temperature | 10.0 | 30 | > th | dose independent | rect. | 18 | 18 |
| 314 | 39.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 6 |
| 325 | 39.36 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 7 |
| 347 | 39.37 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 8 |
| 383 | 39.41 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 384 | 39.41 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 16 | 9 |
| 389 | 39.41 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 16 | 9 |
| 404 | 39.43 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 407 | 39.43 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 10 |
| 439 | 39.46 | humidity | 50.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 456 | 39.47 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 463 | 39.47 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 466 | 39.47 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 470 | 39.47 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 480 | 39.48 | temperature | 30.0 | 10 | < th | dose independent | rect. | 18 | 19 |
| 488 | 39.49 | humidity | 90.0 | 10 | < th | dose independent | rect. | 12 | 6 |
| 495 | 39.49 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 496 | 39.49 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 514 | 39.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 2 |
| 527 | 39.52 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 541 | 39.53 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 21 |
| 570 | 39.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 22 |
| 580 | 39.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 22 |
| 587 | 39.57 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 6 |
| 601 | 39.58 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 16 | 21 |
| 614 | 39.58 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 16 | 21 |
| 631 | 39.60 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 638 | 39.60 | humidity | 50.0 | 30 | > th | dose independent | rect. | 16 | 21 |
| 644 | 39.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 2 |
| 646 | 39.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 2 |
| 647 | 39.61 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 2 |
| 653 | 39.61 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 660 | 39.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 22 |
| 671 | 39.62 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 2 |
| 672 | 39.62 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 2 |
| 683 | 39.62 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 2 |
| 710 | 39.64 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 18 |
| 722 | 39.65 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 6 |
| 750 | 39.66 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 2 |
| 766 | 39.67 | wind | 1.0 | 30 | > th | dose independent | rect. | 13 | 3 |
| 767 | 39.67 | wind | 9.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 786 | 39.67 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 16 | 21 |
| 794 | 39.68 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 827 | 39.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 3 |
| 829 | 39.70 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 831 | 39.70 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 3 |
| 832 | 39.70 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 842 | 39.70 | temperature | 10.0 | 10 | > th | dose independent | rect. | 16 | 21 |
| 843 | 39.70 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 855 | 39.71 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 2 |
| 881 | 39.72 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 927 | 39.74 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 13 | 16 |
| 932 | 39.75 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 937 | 39.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 945 | 39.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 957 | 39.76 | radiation | 10.0 | 10 | < th | dose independent | sin | 4 | NA |
| 960 | 39.76 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 13 | 3 |