BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0186500 Os03g0186500|AK111688
(1308 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0186500 Myoactive tetradecapeptides family protein 2279 0.0
>Os03g0186500 Myoactive tetradecapeptides family protein
Length = 1308
Score = 2279 bits (5905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1136/1308 (86%), Positives = 1136/1308 (86%)
Query: 1 MFFFPFFLPWIPMATTVKSRXXXXXXXXXXHALPAVTTRRRGXXXXXXXXXXXXVFLSAP 60
MFFFPFFLPWIPMATTVKSR HALPAVTTRRRG VFLSAP
Sbjct: 1 MFFFPFFLPWIPMATTVKSRPPPPPPPPPPHALPAVTTRRRGSSSSSPAAAKASVFLSAP 60
Query: 61 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCLGFRDGCADRSALCFSPSAV 120
R CLGFRDGCADRSALCFSPSAV
Sbjct: 61 RELLLVLCSLLVVAVLFVSSSAAAAAEDGAEGSDGDLGGCLGFRDGCADRSALCFSPSAV 120
Query: 121 ESMLASEDDGVKEMDLVVSRDWGXXXXXSLGFRLPGHRGVVTCSSAADALITSRNGVGRE 180
ESMLASEDDGVKEMDLVVSRDWG SLGFRLPGHRGVVTCSSAADALITSRNGVGRE
Sbjct: 121 ESMLASEDDGVKEMDLVVSRDWGPPPPPSLGFRLPGHRGVVTCSSAADALITSRNGVGRE 180
Query: 181 DGGERWYNVASCQAPLVPDNWMRAMAGATPELDAADASTDGIFGSSSLDVEISPPVLDWG 240
DGGERWYNVASCQAPLVPDNWMRAMAGATPELDAADASTDGIFGSSSLDVEISPPVLDWG
Sbjct: 181 DGGERWYNVASCQAPLVPDNWMRAMAGATPELDAADASTDGIFGSSSLDVEISPPVLDWG 240
Query: 241 KSSLYVASMATLTVVNLNNDSALRVYEPFSTDPQFYVYGYDDLVLQPRENASVTFIFLPK 300
KSSLYVASMATLTVVNLNNDSALRVYEPFSTDPQFYVYGYDDLVLQPRENASVTFIFLPK
Sbjct: 241 KSSLYVASMATLTVVNLNNDSALRVYEPFSTDPQFYVYGYDDLVLQPRENASVTFIFLPK 300
Query: 301 LLGSSSAHLVLQTNFGGFIIQAKGMAVRSPYQLEPLAGMDVITGGRLERNLSIFNPFDDS 360
LLGSSSAHLVLQTNFGGFIIQAKGMAVRSPYQLEPLAGMDVITGGRLERNLSIFNPFDDS
Sbjct: 301 LLGSSSAHLVLQTNFGGFIIQAKGMAVRSPYQLEPLAGMDVITGGRLERNLSIFNPFDDS 360
Query: 361 LYVEEVAVWMSSFQGTKQSSHIVCQLGPFDESLEFTSLSSNWYTASSTEFGLPMIHIRPS 420
LYVEEVAVWMSSFQGTKQSSHIVCQLGPFDESLEFTSLSSNWYTASSTEFGLPMIHIRPS
Sbjct: 361 LYVEEVAVWMSSFQGTKQSSHIVCQLGPFDESLEFTSLSSNWYTASSTEFGLPMIHIRPS 420
Query: 421 EQWEVLPTQSSTVVELKLQPLSEGMVFGAICMKLRNCTSDRVDTVVIPMELEVRARTYHE 480
EQWEVLPTQSSTVVELKLQPLSEGMVFGAICMKLRNCTSDRVDTVVIPMELEVRARTYHE
Sbjct: 421 EQWEVLPTQSSTVVELKLQPLSEGMVFGAICMKLRNCTSDRVDTVVIPMELEVRARTYHE 480
Query: 481 PTNLVSVTFERVSSCAGVGSIISLSLRNEGTKLLRIVRVTEDNRDGSNNFEVKYLNGLIL 540
PTNLVSVTFERVSSCAGVGSIISLSLRNEGTKLLRIVRVTEDNRDGSNNFEVKYLNGLIL
Sbjct: 481 PTNLVSVTFERVSSCAGVGSIISLSLRNEGTKLLRIVRVTEDNRDGSNNFEVKYLNGLIL 540
Query: 541 FPDTVTDIALIKYTSVPTDNSFDNCNIVVETNSSVGSSILIPCRDVISATLSYTASAVTE 600
FPDTVTDIALIKYTSVPTDNSFDNCNIVVETNSSVGSSILIPCRDVISATLSYTASAVTE
Sbjct: 541 FPDTVTDIALIKYTSVPTDNSFDNCNIVVETNSSVGSSILIPCRDVISATLSYTASAVTE 600
Query: 601 SDGPFSEDELSANSRTGSLGSIVEVKGLQHMKPTITRAYKADDTVLRRWRSHGTRTGISV 660
SDGPFSEDELSANSRTGSLGSIVEVKGLQHMKPTITRAYKADDTVLRRWRSHGTRTGISV
Sbjct: 601 SDGPFSEDELSANSRTGSLGSIVEVKGLQHMKPTITRAYKADDTVLRRWRSHGTRTGISV 660
Query: 661 LTDQKMLFPIVQVGSQFSKWITVHNPSLEHASMQLVLNSEEIIGQCKTINDACEHTFSSR 720
LTDQKMLFPIVQVGSQFSKWITVHNPSLEHASMQLVLNSEEIIGQCKTINDACEHTFSSR
Sbjct: 661 LTDQKMLFPIVQVGSQFSKWITVHNPSLEHASMQLVLNSEEIIGQCKTINDACEHTFSSR 720
Query: 721 SPEVDSTETRFGFSLSDAAITEAIVGPLESALLGPIIFRPSNQCMWSSMVLIRSNISGME 780
SPEVDSTETRFGFSLSDAAITEAIVGPLESALLGPIIFRPSNQCMWSSMVLIRSNISGME
Sbjct: 721 SPEVDSTETRFGFSLSDAAITEAIVGPLESALLGPIIFRPSNQCMWSSMVLIRSNISGME 780
Query: 781 WLPLQAHGGRQSIVLLEESEPVWKLEFNLISDIQNKSALSKSEFTSPLCGQHLSKEIHVK 840
WLPLQAHGGRQSIVLLEESEPVWKLEFNLISDIQNKSALSKSEFTSPLCGQHLSKEIHVK
Sbjct: 781 WLPLQAHGGRQSIVLLEESEPVWKLEFNLISDIQNKSALSKSEFTSPLCGQHLSKEIHVK 840
Query: 841 NSGDLPLQVTKVKISGADCAVDGFSVDNCKGFSLAPSESIRMLVSFKADFSSAMVQRDLE 900
NSGDLPLQVTKVKISGADCAVDGFSVDNCKGFSLAPSESIRMLVSFKADFSSAMVQRDLE
Sbjct: 841 NSGDLPLQVTKVKISGADCAVDGFSVDNCKGFSLAPSESIRMLVSFKADFSSAMVQRDLE 900
Query: 901 LAMTTGIFIIPMTANIPVCMLDQCRKSYLRSIHWKTLIFLFGTVSVFVLVFARGVPTSLS 960
LAMTTGIFIIPMTANIPVCMLDQCRKSYLRSIHWKTLIFLFGTVSVFVLVFARGVPTSLS
Sbjct: 901 LAMTTGIFIIPMTANIPVCMLDQCRKSYLRSIHWKTLIFLFGTVSVFVLVFARGVPTSLS 960
Query: 961 GGSQDCYIKIHDGKGTIDKPVKPSFLQCSSKTSRSTREHKRDKETHKYPADIHNSPKRTE 1020
GGSQDCYIKIHDGKGTIDKPVKPSFLQCSSKTSRSTREHKRDKETHKYPADIHNSPKRTE
Sbjct: 961 GGSQDCYIKIHDGKGTIDKPVKPSFLQCSSKTSRSTREHKRDKETHKYPADIHNSPKRTE 1020
Query: 1021 DKNNADEQLNTTSTMSLPPSNTVEDKVSIEAPETSGNLTIXXXXXXXXXXXXXXXXXXXX 1080
DKNNADEQLNTTSTMSLPPSNTVEDKVSIEAPETSGNLTI
Sbjct: 1021 DKNNADEQLNTTSTMSLPPSNTVEDKVSIEAPETSGNLTIRVARDKGKRRKRKVGGAGLA 1080
Query: 1081 XXFEVXXXXXXXXXXXXXXXXXXXXXXXWSFSGTPSELKHSSKLENGSDIEARPPSARNN 1140
FEV WSFSGTPSELKHSSKLENGSDIEARPPSARNN
Sbjct: 1081 AKFEVSSSHSGNSTPSSPLSPSSTPKQSWSFSGTPSELKHSSKLENGSDIEARPPSARNN 1140
Query: 1141 HEKSSWLQTAKEQPAXXXXXXXXXXXXXXXXXXXXXXNAWXXXXXXXXXXXXXXXXXXGS 1200
HEKSSWLQTAKEQPA NAW GS
Sbjct: 1141 HEKSSWLQTAKEQPAPPPSVTSGNPSPSPSPSPTAPTNAWRSPLLSSPSPIAPRSRAPGS 1200
Query: 1201 NLMKDKAVKRTEGXXXXXXXRKKDFTYDIWGDHFSGHLLGKAREVAPPCYKMFAASEGAS 1260
NLMKDKAVKRTEG RKKDFTYDIWGDHFSGHLLGKAREVAPPCYKMFAASEGAS
Sbjct: 1201 NLMKDKAVKRTEGAATTTTTRKKDFTYDIWGDHFSGHLLGKAREVAPPCYKMFAASEGAS 1260
Query: 1261 NSFFAREPQALVTKXXXXXXXXXXXXXXXVTRGRGSLPSDVASGYGIN 1308
NSFFAREPQALVTK VTRGRGSLPSDVASGYGIN
Sbjct: 1261 NSFFAREPQALVTKPPSPSPSSSSSSSPPVTRGRGSLPSDVASGYGIN 1308
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 38,417,196
Number of extensions: 1495400
Number of successful extensions: 3571
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3567
Number of HSP's successfully gapped: 1
Length of query: 1308
Length of database: 17,035,801
Length adjustment: 113
Effective length of query: 1195
Effective length of database: 11,135,619
Effective search space: 13307064705
Effective search space used: 13307064705
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 162 (67.0 bits)