Os03g0181100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZIM domain containing protein.
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Os03g0181100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZIM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 563.89 | 1.12 | 9.66 | -1.83 | 1.24 | -0.224 | 1.83 | -8.68 | 0.54 | 9.17 | 20.3 | 75 | -- | -- |
| 630.93 | 1.17 | 9.49 | -0.362 | 1.3 | -0.531 | 1.02 | -- | 0.97 | 8.6 | 20.4 | 34 | -- | -- |
| 569.02 | 1.11 | 9.68 | -1.99 | 1.28 | 0.176 | -- | -8.78 | 0.421 | 8.33 | 20.21 | 271 | -- | -- |
| 630.42 | 1.18 | 9.48 | -0.27 | 1.28 | -0.819 | -- | -- | 0.956 | 9.15 | 24.26 | 76 | -- | -- |
| 646.05 | 1.18 | 9.7 | -1.91 | -- | -0.506 | -- | -8.73 | 0.557 | -- | 19.5 | 405 | -- | -- |
| 636.97 | 1.18 | 9.5 | -0.434 | 1.3 | -- | 1.17 | -- | 0.864 | 8.04 | -- | -- | -- | -- |
| 640.91 | 1.19 | 9.5 | -0.4 | 1.3 | -- | -- | -- | 0.864 | 8.18 | -- | -- | -- | -- |
| 695.44 | 1.23 | 9.51 | -0.167 | -- | -1.16 | -- | -- | 0.985 | -- | 24.5 | 590 | -- | -- |
| 630.28 | 1.17 | 9.47 | -- | 1.22 | -0.922 | -- | -- | 1 | 9.35 | 24.1 | 77 | -- | -- |
| 733.63 | 1.27 | 9.54 | -0.389 | -- | -- | -- | -- | 0.879 | -- | -- | -- | -- | -- |
| 645.12 | 1.19 | 9.49 | -- | 1.3 | -- | -- | -- | 0.908 | 8.2 | -- | -- | -- | -- |
| 696.14 | 1.23 | 9.51 | -- | -- | -1.18 | -- | -- | 1 | -- | 24.5 | 596 | -- | -- |
| 737.63 | 1.27 | 9.53 | -- | -- | -- | -- | -- | 0.922 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 549.92 | temperature | 20 | 30 | > th | dose dependent | rect. | 8 | 20 |
| 19 | 555.22 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 22 |
| 28 | 557.20 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 32 | 557.98 | temperature | 30 | 10 | < th | dose dependent | sin | 17 | NA |
| 35 | 558.30 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 11 |
| 38 | 558.63 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 17 |
| 51 | 560.28 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 75 | 562.09 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 15 |
| 82 | 562.45 | wind | 3 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 98 | 562.98 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 100 | 563.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 107 | 563.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 114 | 563.71 | wind | 5 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 115 | 563.80 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 127 | 564.41 | wind | 7 | 90 | < th | dose independent | sin | 11 | NA |
| 130 | 564.49 | wind | 7 | 270 | < th | dose independent | rect. | 17 | 23 |
| 134 | 564.65 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 138 | 564.76 | temperature | 20 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 143 | 565.04 | wind | 7 | 90 | > th | dose dependent | sin | 11 | NA |
| 151 | 565.39 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 155 | 565.52 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 164 | 565.94 | wind | 5 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 171 | 566.09 | wind | 7 | 90 | > th | dose independent | sin | 11 | NA |
| 173 | 566.17 | temperature | 10 | 10 | > th | dose dependent | sin | 16 | NA |
| 175 | 566.28 | wind | 5 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 183 | 566.55 | wind | 5 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 197 | 566.79 | wind | 5 | 90 | > th | dose dependent | sin | 13 | NA |
| 237 | 567.52 | wind | 5 | 270 | < th | dose independent | rect. | 5 | 23 |
| 305 | 568.78 | temperature | 25 | 270 | < th | dose independent | rect. | 22 | 23 |
| 308 | 568.82 | wind | 5 | 270 | > th | dose dependent | no | NA | NA |
| 329 | 569.11 | wind | 5 | 270 | > th | dose dependent | rect. | 15 | 20 |
| 354 | 569.67 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 384 | 569.98 | wind | 5 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 394 | 570.06 | wind | 5 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 402 | 570.18 | wind | 5 | 270 | > th | dose dependent | sin | 17 | NA |
| 428 | 570.53 | wind | 5 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 432 | 570.61 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 22 |
| 434 | 570.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 444 | 570.78 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 23 |
| 457 | 570.98 | wind | 5 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 471 | 571.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 500 | 571.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 509 | 571.41 | temperature | 10 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 510 | 571.44 | wind | 9 | 720 | < th | dose independent | sin | 5 | NA |
| 547 | 571.94 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 556 | 572.01 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 569 | 572.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 574 | 572.19 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 587 | 572.31 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 605 | 572.48 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 610 | 572.50 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 628 | 572.60 | wind | 9 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 636 | 572.69 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 638 | 572.72 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 640 | 572.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 658 | 572.90 | wind | 5 | 90 | > th | dose dependent | rect. | 17 | 9 |
| 663 | 572.98 | temperature | 25 | 270 | < th | dose independent | rect. | 9 | 23 |
| 690 | 573.19 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 707 | 573.29 | wind | 9 | 720 | > th | dose dependent | sin | 5 | NA |
| 709 | 573.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 718 | 573.39 | wind | 5 | 720 | > th | dose independent | rect. | 11 | 2 |
| 719 | 573.39 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 17 |
| 726 | 573.42 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 730 | 573.43 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 736 | 573.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 750 | 573.59 | wind | 5 | 270 | > th | dose independent | rect. | 7 | 19 |
| 755 | 573.62 | wind | 3 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 771 | 573.75 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 21 |
| 774 | 573.78 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 784 | 573.84 | wind | 5 | 270 | < th | dose independent | rect. | 11 | 14 |
| 810 | 574.09 | wind | 5 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 815 | 574.13 | wind | 7 | 270 | < th | dose independent | sin | 17 | NA |
| 822 | 574.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 13 |
| 826 | 574.19 | temperature | 20 | 720 | > th | dose dependent | sin | 0 | NA |
| 836 | 574.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 850 | 574.30 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 21 |
| 863 | 574.36 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 864 | 574.36 | wind | 7 | 270 | > th | dose independent | rect. | 15 | 20 |
| 869 | 574.38 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 16 |
| 876 | 574.42 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 10 |
| 884 | 574.46 | wind | 5 | 270 | > th | dose independent | rect. | 15 | 23 |
| 888 | 574.47 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 897 | 574.51 | wind | 9 | 720 | > th | dose independent | sin | 5 | NA |
| 911 | 574.57 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 18 |
| 915 | 574.59 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 22 |
| 921 | 574.65 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 15 |
| 935 | 574.73 | wind | 5 | 720 | > th | dose independent | rect. | 7 | 7 |
| 945 | 574.79 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 947 | 574.80 | wind | 5 | 90 | < th | dose independent | rect. | 21 | 19 |
| 954 | 574.85 | wind | 7 | 270 | > th | dose independent | sin | 16 | NA |
| 966 | 574.90 | wind | 9 | 720 | > th | dose independent | rect. | 9 | 7 |