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Os03g0174900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Similarities with DEHA0F28138g Debaryomyces hansenii IPF 5920.1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0216) R2 : 0.686
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.9 (0.0636) R2dE : 0.678 R2E : 0.686
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0257 (0.0476) R2dN8 : -8e-05 R2N8 : 0.0081
σ : 0.401
deviance : 74.25
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 18.8
memory length : 45325
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.84 0.369 11 1.36 0.517 -1.33 0.457 -0.351 0.383 20.4 19.97 4389 -- --
61.29 0.365 11 1.39 0.511 -1.14 0.499 -- 0.351 20.4 21.06 4406 -- --
62.48 0.368 11 1.34 0.517 -1.34 -- -0.337 0.381 20.3 19.98 4410 -- --
62.06 0.367 11 1.37 0.51 -1.15 -- -- 0.347 20.2 21.1 4342 -- --
75.76 0.405 11 1.41 -- -1.12 -- -0.0203 0.359 -- 21.07 3759 -- --
89.04 0.442 10.9 2.1 0.505 -- 0.567 -- 0.711 20.6 -- -- -- --
90.07 0.444 10.9 2.08 0.505 -- -- -- 0.712 20.5 -- -- -- --
75.65 0.405 11 1.32 -- -1.17 -- -- 0.326 -- 21.2 5145 -- --
60.91 0.364 11 -- 0.529 -1.9 -- -- 0.0268 20.3 18.8 46132 -- --
104.32 0.477 10.9 2.08 -- -- -- -- 0.707 -- -- -- -- --
203.83 0.668 11 -- 0.498 -- -- -- 0.48 20.8 -- -- -- --
74.25 0.401 11 -- -- -1.9 -- -- 0.0257 -- 18.8 45325 -- --
217.92 0.689 10.9 -- -- -- -- -- 0.476 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.57 humidity 90.0 14400 > th dose dependent rect. 5 1
2 54.78 radiation 1.0 43200 < th dose dependent rect. 20 9
4 54.84 radiation 1.0 43200 < th dose dependent rect. 23 6
8 55.25 radiation 1.0 43200 < th dose independent rect. 18 11
9 55.33 radiation 1.0 43200 < th dose independent rect. 18 7
13 55.35 radiation 1.0 43200 < th dose independent rect. 18 1
14 55.35 radiation 1.0 43200 < th dose independent rect. 18 3
15 55.35 radiation 1.0 43200 < th dose independent rect. 18 5
19 55.37 radiation 1.0 43200 > th dose independent rect. 18 11
20 55.49 radiation 1.0 43200 > th dose independent rect. 18 1
31 55.76 wind 1.0 43200 < th dose dependent rect. 23 3
33 56.04 radiation 1.0 14400 < th dose independent rect. 6 1
34 56.09 radiation 1.0 14400 > th dose independent rect. 6 1
35 56.11 humidity 70.0 43200 < th dose dependent rect. 22 11
37 56.16 humidity 60.0 43200 < th dose dependent rect. 20 15
38 56.20 humidity 60.0 43200 < th dose independent rect. 20 15
43 56.39 humidity 60.0 43200 > th dose independent rect. 20 14
47 56.43 humidity 70.0 43200 < th dose dependent rect. 6 3
48 56.44 humidity 60.0 43200 > th dose independent rect. 21 12
52 56.46 radiation 1.0 43200 < th dose dependent rect. 3 2
53 56.47 humidity 70.0 43200 < th dose dependent rect. 4 5
60 56.48 humidity 60.0 43200 < th dose dependent rect. 2 9
63 56.49 humidity 70.0 43200 < th dose dependent rect. 2 7
69 56.57 humidity 90.0 14400 < th dose independent rect. 24 1
70 56.57 humidity 60.0 43200 > th dose independent rect. 4 5
71 56.58 humidity 60.0 43200 < th dose independent rect. 4 5
72 56.59 humidity 60.0 43200 > th dose independent rect. 2 7
73 56.60 humidity 60.0 43200 > th dose independent rect. 6 3
74 56.60 humidity 60.0 43200 < th dose independent rect. 6 3
95 56.80 humidity 60.0 43200 < th dose independent rect. 24 11
133 57.21 wind 3.0 43200 < th dose dependent rect. 21 2
141 57.28 radiation 1.0 43200 < th dose dependent rect. 18 8
150 57.38 radiation 1.0 43200 < th dose dependent rect. 18 1
151 57.38 radiation 1.0 43200 < th dose dependent rect. 18 3
161 57.46 wind 1.0 43200 < th dose independent rect. 22 4
166 57.52 atmosphere 1010.0 43200 < th dose independent rect. 5 1
171 57.58 atmosphere 1010.0 43200 > th dose dependent rect. 5 1
172 57.59 humidity 60.0 43200 < th dose dependent sin 8 NA
179 57.65 wind 1.0 14400 < th dose dependent rect. 22 7
241 57.85 atmosphere 1010.0 43200 > th dose dependent rect. 7 1
285 57.97 atmosphere 1010.0 43200 > th dose dependent sin 7 NA
287 57.97 wind 1.0 43200 < th dose dependent rect. 20 6
302 58.00 humidity 90.0 14400 < th dose independent rect. 23 4
312 58.02 atmosphere 1010.0 43200 > th dose independent rect. 6 1
339 58.06 atmosphere 1010.0 43200 < th dose independent rect. 9 1
357 58.09 atmosphere 1010.0 43200 < th dose independent rect. 5 6
424 58.17 atmosphere 1010.0 43200 > th dose independent rect. 9 1
436 58.18 atmosphere 1010.0 43200 < th dose independent rect. 22 1
489 58.24 atmosphere 1010.0 43200 < th dose independent rect. 22 13
507 58.25 radiation 1.0 43200 < th dose dependent rect. 18 18
527 58.27 atmosphere 1010.0 43200 > th dose independent rect. 5 5
623 58.33 atmosphere 1010.0 43200 < th dose independent sin 6 NA
626 58.33 atmosphere 1010.0 43200 > th dose dependent no NA NA
674 58.35 atmosphere 1010.0 43200 > th dose dependent rect. 7 23
675 58.35 atmosphere 1010.0 43200 > th dose dependent rect. 9 23
699 58.37 humidity 90.0 14400 < th dose independent rect. 2 1
715 58.38 precipitation 0.1 43200 > th dose independent rect. 2 5
716 58.38 precipitation 0.1 43200 < th dose independent rect. 2 5
723 58.38 precipitation 0.1 43200 < th dose dependent rect. 2 5
725 58.38 humidity 90.0 14400 > th dose dependent rect. 23 7
985 58.52 precipitation 0.1 43200 > th dose independent rect. 4 3