Os03g0169400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L18P/L5E family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0169400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ribosomal protein L18P/L5E family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.57 | 0.242 | 10.8 | 0.225 | 1.12 | 0.59 | -0.075 | 0.853 | 0.241 | 17.8 | 21.8 | 657 | -- | -- |
| 28.77 | 0.25 | 10.8 | -0.0163 | 1.16 | 0.549 | 0.198 | -- | 0.233 | 17.9 | 22 | 533 | -- | -- |
| 26.58 | 0.24 | 10.8 | 0.22 | 1.12 | 0.589 | -- | 0.833 | 0.239 | 17.8 | 21.83 | 657 | -- | -- |
| 28.56 | 0.249 | 10.9 | -0.011 | 1.11 | 0.546 | -- | -- | 0.182 | 17.9 | 22.04 | 546 | -- | -- |
| 68.25 | 0.385 | 10.9 | 0.108 | -- | 0.837 | -- | 0.896 | 0.246 | -- | 26.3 | 395 | -- | -- |
| 42.33 | 0.305 | 10.8 | 0.171 | 1.2 | -- | 0.361 | -- | 0.358 | 18.1 | -- | -- | -- | -- |
| 42.64 | 0.306 | 10.8 | 0.168 | 1.2 | -- | -- | -- | 0.359 | 18 | -- | -- | -- | -- |
| 64.76 | 0.375 | 10.9 | -0.109 | -- | 0.92 | -- | -- | 0.0882 | -- | 26.32 | 394 | -- | -- |
| 28.56 | 0.249 | 10.9 | -- | 1.11 | 0.545 | -- | -- | 0.183 | 17.9 | 22.05 | 546 | -- | -- |
| 117.22 | 0.506 | 10.8 | 0.133 | -- | -- | -- | -- | 0.332 | -- | -- | -- | -- | -- |
| 43.39 | 0.308 | 10.8 | -- | 1.2 | -- | -- | -- | 0.34 | 18.1 | -- | -- | -- | -- |
| 65.06 | 0.376 | 10.9 | -- | -- | 0.907 | -- | -- | 0.103 | -- | 26.3 | 393 | -- | -- |
| 117.69 | 0.506 | 10.8 | -- | -- | -- | -- | -- | 0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 22 |
| 3 | 27.73 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 8 | 27.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 14 | 27.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 22 |
| 22 | 27.87 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 35 | 27.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 133 | 28.87 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 201 | 29.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 255 | 29.77 | temperature | 25 | 720 | < th | dose dependent | sin | 0 | NA |
| 273 | 29.87 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 288 | 29.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 16 |
| 328 | 30.08 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 8 |
| 511 | 30.57 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 585 | 30.71 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 636 | 30.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 651 | 30.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 670 | 30.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 856 | 30.96 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 19 |