Os03g0168300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0168300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 450.42 | 0.997 | 4.5 | -3.8 | 1.07 | 1.63 | -4.65 | 7.9 | -0.75 | 10.6 | 0.986 | 4253 | -- | -- |
| 446.76 | 0.984 | 4.23 | -2.53 | 1.33 | 1.28 | -4.11 | -- | -0.257 | 11 | 89.81 | 13249 | -- | -- |
| 494.71 | 1.04 | 4.55 | -4 | 1.37 | 1.78 | -- | 7.64 | -0.648 | 10.9 | 1.608 | 20416 | -- | -- |
| 501.43 | 1.04 | 4.26 | -2.72 | 1.34 | 1.36 | -- | -- | -0.244 | 11.6 | 18.34 | 11879 | -- | -- |
| 520.25 | 1.07 | 4.38 | -2.75 | -- | -0.911 | -- | 2.94 | -0.631 | -- | 1.271 | 21467 | -- | -- |
| 499.76 | 1.05 | 4.33 | -2.5 | 1.28 | -- | -3.72 | -- | -0.585 | 10.9 | -- | -- | -- | -- |
| 556.23 | 1.1 | 4.34 | -2.65 | 1.3 | -- | -- | -- | -0.592 | 11.4 | -- | -- | -- | -- |
| 575.04 | 1.12 | 4.37 | -2.71 | -- | -0.893 | -- | -- | -0.616 | -- | 1.271 | 21467 | -- | -- |
| 658.86 | 1.2 | 4.2 | -- | 1.14 | 1.53 | -- | -- | 0.0848 | 11.3 | 4.565 | 12963 | -- | -- |
| 661.74 | 1.2 | 4.37 | -2.68 | -- | -- | -- | -- | -0.605 | -- | -- | -- | -- | -- |
| 740.71 | 1.27 | 4.27 | -- | 1.33 | -- | -- | -- | -0.298 | 11.5 | -- | -- | -- | -- |
| 632.59 | 1.17 | 4.15 | -- | -- | 2.71 | -- | -- | 0.374 | -- | 3.961 | 38507 | -- | -- |
| 851.12 | 1.36 | 4.3 | -- | -- | -- | -- | -- | -0.308 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 431.60 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 2 | 431.63 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 3 | 432.72 | temperature | 25 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 4 | 432.74 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 5 | 432.79 | temperature | 25 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 13 | 433.85 | temperature | 25 | 43200 | < th | dose independent | rect. | 12 | 11 |
| 15 | 434.05 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 20 | 434.10 | temperature | 25 | 43200 | > th | dose independent | rect. | 12 | 11 |
| 28 | 434.22 | temperature | 20 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 59 | 434.52 | temperature | 25 | 43200 | < th | dose independent | sin | 18 | NA |
| 90 | 434.77 | temperature | 25 | 43200 | > th | dose independent | sin | 18 | NA |
| 144 | 435.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 265 | 435.44 | temperature | 25 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 326 | 435.62 | temperature | 25 | 43200 | < th | dose independent | no | NA | NA |
| 330 | 435.62 | temperature | 25 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 396 | 435.82 | temperature | 25 | 43200 | > th | dose independent | no | NA | NA |
| 467 | 436.04 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 475 | 436.08 | temperature | 30 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 540 | 436.26 | temperature | 25 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 595 | 436.43 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 617 | 436.50 | temperature | 20 | 43200 | > th | dose dependent | sin | 16 | NA |
| 658 | 436.57 | temperature | 20 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 685 | 436.62 | temperature | 20 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 793 | 436.78 | temperature | 20 | 43200 | > th | dose dependent | rect. | 17 | 18 |
| 813 | 436.81 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 925 | 436.95 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 6 |