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Os03g0158300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Galactose mutarotase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0344) R2 : 0.645
β1 : -1.41 (0.126) R2dD : 0.104 R2D : -0.0871
β2 : 2.01 (0.101) R2dC : 0.409 R2C : 0.099
β3 : -1.19 (0.0951) R2dE : 0.156 R2E : -0.221
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.37 (0.0733) R2dN8 : 0.374 R2N8 : 0.224
σ : 0.642
deviance : 190.07
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C
peak time of C : 19.3
E
wheather : radiation
threshold : 23.16
memory length : 105
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 4.95
open length of G : 18.2

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
187.7 0.644 10.4 -1.45 2.03 -1.17 -1.24 0.659 -1.38 19.2 22.63 96 5.02 18.1
188.31 0.639 10.4 -1.42 2.01 -1.16 -0.989 -- -1.37 19.3 22.93 103 4.97 18.2
190.43 0.643 10.4 -1.4 2.03 -1.17 -- 0.206 -1.37 19.2 22.49 104 5.03 18.1
190.07 0.642 10.4 -1.41 2.01 -1.19 -- -- -1.37 19.3 23.16 105 4.95 18.2
229.35 0.705 10.3 -1.39 -- -2.38 -- 0.663 -1.28 -- 6.937 920 2.77 21.1
250.7 0.742 10.4 -1.35 1.45 -- -0.984 -- -1.36 18.8 -- -- -- --
253.17 0.745 10.4 -1.33 1.45 -- -- -- -1.36 18.8 -- -- -- --
222.54 0.695 10.3 -1.36 -- -2.6 -- -- -1.3 -- 6.635 930 2.18 20.6
243.84 0.727 10.4 -- 2.01 -1.12 -- -- -1.29 19.2 23.61 97 4.96 18.3
363.36 0.891 10.4 -1.36 -- -- -- -- -1.39 -- -- -- -- --
299.81 0.81 10.4 -- 1.47 -- -- -- -1.21 18.7 -- -- -- --
268.62 0.763 10.3 -- -- -2.42 -- -- -1.28 -- 9.961 894 1.78 21.1
412.35 0.948 10.3 -- -- -- -- -- -1.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 189.60 radiation 20.0 90 < th dose dependent rect. 5 18
2 190.36 humidity 70.0 90 > th dose dependent rect. 5 18
6 192.45 radiation 10.0 90 < th dose independent rect. 5 18
10 195.00 humidity 80.0 90 > th dose independent rect. 5 6
13 196.10 humidity 50.0 270 > th dose dependent rect. 17 15
14 196.12 humidity 70.0 90 > th dose independent rect. 4 19
18 196.57 humidity 70.0 90 > th dose dependent rect. 5 15
19 196.85 humidity 60.0 270 > th dose dependent rect. 3 17
30 197.71 humidity 70.0 90 > th dose dependent rect. 5 6
37 198.09 radiation 20.0 270 < th dose dependent rect. 3 6
43 198.41 humidity 70.0 270 > th dose dependent rect. 3 6
45 198.60 temperature 10.0 270 > th dose dependent rect. 3 4
52 198.74 humidity 90.0 270 < th dose independent rect. 23 16
53 198.74 atmosphere 1000.0 90 > th dose independent rect. 5 18
63 199.16 radiation 10.0 270 < th dose independent rect. 3 5
81 199.62 humidity 80.0 270 > th dose independent rect. 3 5
97 200.32 radiation 10.0 270 < th dose independent rect. 4 3
102 200.42 wind 1.0 90 > th dose independent rect. 23 6
109 200.59 wind 1.0 270 > th dose independent rect. 23 3
118 200.81 wind 1.0 270 > th dose independent rect. 8 19
123 201.01 temperature 20.0 270 > th dose independent rect. 3 4
135 201.28 radiation 30.0 90 < th dose dependent rect. 5 6
136 201.30 precipitation 0.1 270 < th dose independent rect. 7 21
137 201.30 precipitation 0.1 270 < th dose dependent rect. 7 21
147 201.51 radiation 20.0 270 < th dose dependent rect. 2 21
148 201.52 wind 5.0 90 < th dose independent rect. 23 6
175 202.10 radiation 40.0 270 < th dose independent rect. 12 10
176 202.12 humidity 80.0 90 > th dose independent rect. 5 15
179 202.14 radiation 40.0 270 < th dose dependent rect. 2 21
212 202.56 precipitation 0.1 90 < th dose independent rect. 23 6
213 202.56 precipitation 0.1 90 < th dose dependent rect. 23 6
217 202.66 radiation 30.0 270 < th dose dependent rect. 15 17
225 202.77 atmosphere 1010.0 270 < th dose independent rect. 4 3
231 202.82 atmosphere 995.0 270 > th dose independent rect. 17 14
253 203.09 humidity 70.0 270 > th dose dependent rect. 3 11
257 203.12 atmosphere 1000.0 270 > th dose independent rect. 3 4
275 203.30 humidity 50.0 270 > th dose independent rect. 17 14
279 203.35 radiation 10.0 270 < th dose independent rect. 2 21
287 203.47 precipitation 0.1 270 < th dose independent rect. 7 10
288 203.47 precipitation 0.1 270 < th dose dependent rect. 7 10
308 203.70 temperature 10.0 90 > th dose independent rect. 23 6
309 203.70 temperature 30.0 90 < th dose independent rect. 23 6
310 203.70 humidity 50.0 90 > th dose independent rect. 23 6
313 203.70 atmosphere 995.0 90 > th dose independent rect. 23 6
314 203.70 radiation 20.0 90 < th dose independent rect. 23 6
317 203.70 temperature 10.0 90 > th dose independent rect. 5 18
318 203.73 radiation 40.0 90 < th dose dependent rect. 23 6
334 203.83 radiation 1.0 90 < th dose independent rect. 23 6
351 203.94 wind 9.0 270 < th dose independent rect. 7 20
365 204.11 wind 9.0 270 < th dose independent rect. 3 4
366 204.11 temperature 10.0 270 > th dose independent rect. 3 4
368 204.11 temperature 30.0 270 < th dose independent rect. 3 4
369 204.11 humidity 50.0 270 > th dose independent rect. 3 4
374 204.11 temperature 10.0 270 > th dose independent rect. 7 20
375 204.13 humidity 80.0 90 > th dose independent rect. 5 10
376 204.14 radiation 20.0 90 < th dose independent rect. 5 6
377 204.14 atmosphere 1015.0 90 < th dose independent rect. 5 18
379 204.15 radiation 10.0 270 < th dose independent rect. 16 16
405 204.45 humidity 70.0 270 > th dose independent rect. 15 16
418 204.59 wind 1.0 270 > th dose independent rect. 7 10
425 204.62 humidity 70.0 90 > th dose dependent rect. 5 8
460 204.82 humidity 80.0 270 > th dose independent rect. 3 11
461 204.83 wind 7.0 270 < th dose independent rect. 21 6
468 204.92 wind 9.0 270 < th dose independent rect. 7 10
480 205.00 temperature 10.0 270 > th dose independent rect. 7 10
481 205.00 atmosphere 1015.0 270 < th dose independent rect. 7 10
482 205.00 temperature 10.0 270 > th dose independent rect. 17 14
485 205.02 radiation 40.0 90 < th dose independent rect. 5 18
486 205.03 wind 1.0 270 > th dose independent rect. 21 6
523 205.23 precipitation 0.1 270 < th dose independent rect. 6 23
524 205.23 precipitation 0.1 270 < th dose dependent rect. 6 23
526 205.25 wind 9.0 270 < th dose independent rect. 17 14
527 205.25 humidity 70.0 90 > th dose dependent rect. 5 10
531 205.29 temperature 30.0 270 < th dose independent rect. 17 14
580 205.75 precipitation 0.1 270 < th dose independent rect. 4 3
581 205.75 precipitation 0.1 270 < th dose dependent rect. 4 3
601 205.89 wind 9.0 90 < th dose independent rect. 5 18
612 205.97 wind 9.0 270 < th dose dependent rect. 3 4
613 205.98 precipitation 0.1 270 < th dose independent rect. 21 6
615 205.98 precipitation 0.1 270 < th dose dependent rect. 21 6
616 206.00 humidity 80.0 90 > th dose independent rect. 5 12
635 206.14 humidity 50.0 270 > th dose independent rect. 3 17
641 206.17 temperature 10.0 270 > th dose independent rect. 21 6
642 206.17 temperature 30.0 270 < th dose independent rect. 21 6
643 206.17 humidity 50.0 270 > th dose independent rect. 21 6
646 206.17 atmosphere 995.0 270 > th dose independent rect. 21 6
647 206.17 radiation 1.0 270 < th dose independent rect. 21 6
652 206.17 temperature 10.0 270 > th dose independent rect. 3 18
653 206.17 radiation 1.0 270 < th dose dependent rect. 21 6
683 206.23 radiation 40.0 270 < th dose independent rect. 2 21
727 206.55 atmosphere 1015.0 270 < th dose independent rect. 3 18
738 206.63 wind 5.0 270 < th dose independent rect. 23 3
740 206.65 radiation 40.0 270 < th dose independent rect. 3 18
752 206.79 precipitation 0.1 270 < th dose independent rect. 23 2
753 206.79 precipitation 0.1 270 < th dose dependent rect. 23 2
771 206.99 temperature 10.0 270 > th dose independent rect. 23 2
772 206.99 temperature 30.0 270 < th dose independent rect. 23 2
773 206.99 humidity 50.0 270 > th dose independent rect. 23 2
776 206.99 atmosphere 995.0 270 > th dose independent rect. 23 2
777 206.99 radiation 1.0 270 < th dose independent rect. 23 2
782 206.99 temperature 10.0 270 > th dose independent rect. 1 22
783 206.99 radiation 1.0 270 < th dose dependent rect. 23 2
840 207.40 precipitation 0.1 90 < th dose independent rect. 5 18
841 207.40 precipitation 0.1 90 < th dose dependent rect. 5 18
869 207.54 atmosphere 1015.0 90 < th dose independent rect. 23 6
882 207.65 wind 9.0 270 < th dose independent rect. 3 18
919 207.94 temperature 25.0 10 > th dose dependent rect. 18 14
995 208.31 radiation 1.0 270 > th dose independent rect. 7 10