BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0158300 Os03g0158300|AK066591
         (359 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0158300  Galactose mutarotase-like domain containing pr...   592   e-169
Os03g0748300  Aldose 1-epimerase family protein                   101   1e-21

>Os03g0158300 Galactose mutarotase-like domain containing protein
          Length = 359

 Score =  592 bits (1527), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 298/359 (83%), Positives = 298/359 (83%)

Query: 1   MATSSLLPLHLPXXXXXXXXXXXXXXXXXXXXXXLEESFGRKGLRFAADPATGAPTAELS 60
           MATSSLLPLHLP                      LEESFGRKGLRFAADPATGAPTAELS
Sbjct: 1   MATSSLLPLHLPTRPSAVKASAAATAAAAPTPQSLEESFGRKGLRFAADPATGAPTAELS 60

Query: 61  VRNGSSLQLRLADGLVTSYRPKVYWKDDGCREVLHTXXXXXXXXXXXXXXXLALSEVSSS 120
           VRNGSSLQLRLADGLVTSYRPKVYWKDDGCREVLHT               LALSEVSSS
Sbjct: 61  VRNGSSLQLRLADGLVTSYRPKVYWKDDGCREVLHTVAGAGAGGEVKGGVGLALSEVSSS 120

Query: 121 GAAESLLVGSEWXXXXXXXXXXXXXXXELGCTKGSGTLEVTYVVTLYPLSMATAVMVKNN 180
           GAAESLLVGSEW               ELGCTKGSGTLEVTYVVTLYPLSMATAVMVKNN
Sbjct: 121 GAAESLLVGSEWSVVDADSDSYDAVQVELGCTKGSGTLEVTYVVTLYPLSMATAVMVKNN 180

Query: 181 GKKPVSLTSAMLSHIKFDKRRGTAVEGLRGCPYCSHPPPAAGFALLTPAEAMKREDXXXX 240
           GKKPVSLTSAMLSHIKFDKRRGTAVEGLRGCPYCSHPPPAAGFALLTPAEAMKRED    
Sbjct: 181 GKKPVSLTSAMLSHIKFDKRRGTAVEGLRGCPYCSHPPPAAGFALLTPAEAMKREDGGWF 240

Query: 241 XXXXXEEPRQGVWTVEDNLYTILKKKVSRVYAAPPEERKKRIYSTAPSKFTTIDQNSGLG 300
                EEPRQGVWTVEDNLYTILKKKVSRVYAAPPEERKKRIYSTAPSKFTTIDQNSGLG
Sbjct: 241 GGGGGEEPRQGVWTVEDNLYTILKKKVSRVYAAPPEERKKRIYSTAPSKFTTIDQNSGLG 300

Query: 301 FRVVRMGYEDMYLCSPGEMYRKFGKDYFLCTGTASMLVPVVVNPGEEWRAAQVIEHDNL 359
           FRVVRMGYEDMYLCSPGEMYRKFGKDYFLCTGTASMLVPVVVNPGEEWRAAQVIEHDNL
Sbjct: 301 FRVVRMGYEDMYLCSPGEMYRKFGKDYFLCTGTASMLVPVVVNPGEEWRAAQVIEHDNL 359



>Os03g0748300 Aldose 1-epimerase family protein
          Length = 411

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 145/346 (41%), Gaps = 36/346 (10%)

Query: 35  LEESFGRKGLRFAADPATGAPTAELSVRNGSSLQLRLADGLVTSYRPKVYWKDDGCREVL 94
           L   F   G+ F A    G+   ++ +RNGS+  + L  GLVTSY+P ++       EV+
Sbjct: 81  LAAEFAGHGVSFEA--VGGSCAVKMELRNGSAAHVLLPGGLVTSYKPAMW--HGAPTEVI 136

Query: 95  HTXXXXXXXXXXXXXXXLALSEVSSSGAAESLLV------GSEWXXXXXXXXXXXXXXXE 148
           HT               ++L       A               W               E
Sbjct: 137 HTTVAEGLGGRAVIRGGVSLDLRCGGAAGGGGDGMPPWSPSGAWSLRDVRGSPTGSIEVE 196

Query: 149 LGCT---KGSGTLEVTYVVTLYPLSMATAVMVKNNGK-KPVSLTSAMLSHIKFDKRRGTA 204
           L      + SG +E   VVTL+P ++AT    +N     PV+L++A+ +H++      T 
Sbjct: 197 LASAAPPEASG-VEARCVVTLHPEALATEFTARNAASPSPVALSAAVSTHLRVSTPDATY 255

Query: 205 VEGLRGCPYCSHPPPAAGFALLTPAEAMKREDXXXXXXXXXEEPRQGVWTVE--DNLYTI 262
             GL+G  Y +  P  + FA++ P + M R                  W  +  D + + 
Sbjct: 256 AVGLQGSDYRAIDPVLSEFAIVPP-DFMSRSSSATTLARR--------WATKGFDAVLSG 306

Query: 263 LKKKVSRVYAAPPEERKK---------RIYSTAPSKFTTIDQNSGLGFRVVRMGYEDMYL 313
                +    A  EE            RIYS AP +FT ID+       V R G+E++Y+
Sbjct: 307 GGGGGAGAQEADGEEDDDYKRMTEEMCRIYSHAPRQFTIIDRGRRNSICVQRRGFEEVYV 366

Query: 314 CSPGEMYRKFGKDYFLCTGTASMLVPVVVNPGEEWRAAQVIEHDNL 359
            SPG  Y+ +GK  ++C G A ML P+V++PG  W  AQ + + NL
Sbjct: 367 FSPGSKYQWYGKYAYVCVGPA-MLEPIVLSPGATWSGAQYLRNPNL 411



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.133    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,658,883
Number of extensions: 387289
Number of successful extensions: 777
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 775
Number of HSP's successfully gapped: 2
Length of query: 359
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 257
Effective length of database: 11,709,973
Effective search space: 3009463061
Effective search space used: 3009463061
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)