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Os03g0156500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lupus La protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0171) R2 : 0.0581
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.191 (0.036) R2dN8 : 0.075 R2N8 : 0.0581
σ : 0.322
deviance : 47.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.83 0.261 11.6 -0.41 0.641 0.438 -1 -1.88 -0.249 4.53 85.99 360 -- --
33.54 0.27 11.6 -0.333 0.602 0.298 -0.317 -- -0.236 4.47 85 336 -- --
32.4 0.265 11.6 -0.398 0.608 0.398 -- -1.16 -0.243 4.82 81.41 477 -- --
33.77 0.271 11.6 -0.329 0.597 0.299 -- -- -0.231 4.45 84.8 342 -- --
41.83 0.301 11.6 -0.452 -- 0.317 -- -1.46 -0.239 -- 83.35 1154 -- --
34.57 0.276 11.6 -0.311 0.443 -- -0.39 -- -0.237 4.26 -- -- -- --
34.99 0.277 11.6 -0.307 0.44 -- -- -- -0.235 4.26 -- -- -- --
43 0.307 11.6 -0.293 -- -0.305 -- -- -0.221 -- 116.7 1212 -- --
36.56 0.282 11.6 -- 0.574 0.255 -- -- -0.202 4.45 88.01 340 -- --
45.45 0.315 11.6 -0.289 -- -- -- -- -0.223 -- -- -- -- --
37.47 0.286 11.6 -- 0.434 -- -- -- -0.201 4.28 -- -- -- --
45.26 0.314 11.6 -- -- -0.301 -- -- -0.189 -- 116.7 1212 -- --
47.66 0.322 11.6 -- -- -- -- -- -0.191 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.07 humidity 60.0 720 > th dose dependent rect. 7 8
2 30.09 humidity 90.0 720 < th dose dependent rect. 9 5
3 30.16 wind 9.0 43200 > th dose dependent rect. 17 1
5 30.20 radiation 40.0 30 < th dose dependent rect. 22 21
8 30.23 temperature 15.0 720 > th dose dependent rect. 9 4
12 30.27 temperature 30.0 10 < th dose independent rect. 22 21
13 30.27 wind 9.0 43200 > th dose dependent rect. 16 3
19 30.34 temperature 30.0 10 < th dose dependent rect. 8 11
25 30.39 temperature 25.0 4320 > th dose independent rect. 21 4
28 30.40 humidity 80.0 1440 > th dose dependent rect. 11 1
29 30.41 temperature 25.0 4320 < th dose independent rect. 21 4
33 30.42 temperature 25.0 4320 > th dose independent rect. 22 1
34 30.42 temperature 10.0 720 > th dose dependent rect. 1 12
39 30.46 temperature 10.0 720 > th dose dependent rect. 3 10
45 30.47 temperature 15.0 10 > th dose dependent rect. 5 17
47 30.50 radiation 30.0 30 < th dose independent rect. 22 21
49 30.51 radiation 40.0 30 < th dose dependent rect. 8 11
51 30.53 temperature 25.0 4320 < th dose independent rect. 21 1
57 30.55 wind 9.0 43200 < th dose independent rect. 17 1
65 30.57 wind 9.0 43200 < th dose independent rect. 20 2
73 30.60 radiation 10.0 720 > th dose independent rect. 9 4
77 30.62 temperature 15.0 1440 > th dose independent rect. 23 6
85 30.65 humidity 90.0 720 < th dose independent rect. 9 6
88 30.66 wind 9.0 43200 > th dose independent rect. 17 1
93 30.67 temperature 30.0 720 < th dose dependent rect. 7 2
99 30.67 temperature 10.0 270 > th dose dependent rect. 8 13
102 30.68 humidity 70.0 10 > th dose independent rect. 22 21
105 30.68 humidity 80.0 720 < th dose dependent rect. 19 19
117 30.73 humidity 70.0 90 > th dose independent rect. 21 22
128 30.76 temperature 15.0 1440 > th dose independent rect. 23 4
136 30.78 temperature 20.0 720 > th dose independent rect. 9 4
138 30.78 humidity 80.0 720 < th dose independent rect. 22 16
146 30.79 temperature 15.0 270 > th dose dependent rect. 4 17
147 30.80 humidity 50.0 43200 > th dose independent rect. 23 6
152 30.81 temperature 15.0 720 > th dose independent rect. 3 18
156 30.82 temperature 15.0 720 > th dose independent rect. 1 20
157 30.82 precipitation 0.1 14400 > th dose dependent rect. 19 1
166 30.83 humidity 90.0 720 < th dose dependent rect. 23 16
167 30.84 humidity 70.0 720 < th dose independent rect. 10 3
171 30.84 temperature 30.0 270 < th dose dependent rect. 7 9
225 30.91 humidity 80.0 720 < th dose independent rect. 19 19
226 30.91 temperature 30.0 90 < th dose independent rect. 21 22
227 30.91 temperature 30.0 90 < th dose dependent rect. 9 8
230 30.92 temperature 15.0 1440 > th dose independent rect. 1 1
234 30.92 humidity 50.0 43200 < th dose independent rect. 16 17
237 30.92 humidity 50.0 43200 < th dose dependent rect. 16 17
240 30.93 temperature 30.0 10 < th dose independent rect. 8 11
245 30.94 precipitation 0.1 14400 > th dose independent rect. 19 1
246 30.94 radiation 30.0 30 < th dose independent rect. 9 10
248 30.94 humidity 50.0 43200 < th dose independent rect. 17 15
255 30.95 wind 9.0 43200 > th dose independent rect. 20 2
258 30.95 precipitation 0.1 720 > th dose dependent rect. 5 15
261 30.96 temperature 15.0 720 > th dose independent rect. 9 21
275 30.98 wind 3.0 14400 > th dose independent rect. 22 5
279 30.98 humidity 80.0 720 > th dose independent rect. 7 8
280 30.98 humidity 70.0 10 > th dose independent rect. 10 9
284 30.98 humidity 90.0 720 < th dose dependent sin 3 NA
290 30.98 temperature 30.0 10 < th dose dependent rect. 22 21
291 30.99 precipitation 0.1 14400 < th dose independent rect. 19 1
296 30.99 humidity 50.0 43200 > th dose independent rect. 16 17
297 30.99 precipitation 0.1 14400 < th dose dependent rect. 19 1
300 30.99 humidity 60.0 10 > th dose dependent rect. 8 11
309 31.00 temperature 15.0 720 > th dose independent rect. 18 19
323 31.01 wind 3.0 14400 < th dose independent rect. 1 1
335 31.02 radiation 30.0 4320 < th dose independent rect. 11 2
350 31.02 temperature 10.0 10 > th dose dependent rect. 1 23
369 31.04 temperature 20.0 720 < th dose dependent sin 0 NA
374 31.04 wind 7.0 43200 > th dose dependent rect. 20 2
381 31.04 temperature 15.0 10 > th dose dependent rect. 9 13
386 31.05 humidity 80.0 720 < th dose independent rect. 7 7
387 31.05 temperature 15.0 720 > th dose independent rect. 18 12
400 31.06 humidity 50.0 43200 > th dose independent rect. 17 15
412 31.07 humidity 80.0 1440 > th dose independent rect. 10 1
427 31.08 wind 3.0 14400 > th dose independent rect. 1 1
433 31.08 humidity 60.0 720 > th dose dependent sin 0 NA
446 31.09 humidity 60.0 43200 > th dose independent rect. 24 3
449 31.09 precipitation 0.1 720 > th dose independent rect. 5 15
461 31.10 wind 3.0 14400 < th dose independent rect. 22 5
468 31.10 wind 9.0 43200 > th dose dependent rect. 16 6
502 31.11 temperature 30.0 270 < th dose dependent rect. 21 20
507 31.12 humidity 50.0 43200 > th dose independent rect. 23 9
514 31.12 temperature 25.0 270 > th dose dependent rect. 21 11
524 31.13 radiation 30.0 4320 > th dose independent rect. 11 2
535 31.13 humidity 90.0 270 < th dose dependent rect. 9 12
545 31.14 wind 3.0 14400 < th dose independent rect. 23 1
565 31.15 humidity 70.0 270 > th dose independent rect. 21 20
581 31.16 humidity 80.0 720 < th dose independent rect. 4 10
605 31.17 temperature 20.0 720 < th dose dependent rect. 9 5
619 31.18 humidity 90.0 1440 > th dose independent rect. 10 3
622 31.18 temperature 25.0 270 > th dose independent rect. 21 11
636 31.18 humidity 90.0 270 < th dose dependent rect. 9 15
641 31.19 humidity 80.0 1440 < th dose independent rect. 10 1
650 31.19 humidity 70.0 90 > th dose independent rect. 9 10
654 31.19 humidity 80.0 270 < th dose independent rect. 16 23
658 31.19 humidity 50.0 43200 < th dose dependent rect. 16 6
711 31.21 radiation 40.0 270 < th dose dependent rect. 21 19
714 31.22 wind 3.0 14400 > th dose independent rect. 22 2
717 31.22 precipitation 0.1 720 > th dose independent rect. 10 3
726 31.22 humidity 70.0 720 < th dose independent rect. 16 21
728 31.22 precipitation 0.1 720 > th dose dependent rect. 10 3
744 31.23 radiation 20.0 4320 < th dose independent rect. 23 7
748 31.23 temperature 15.0 1440 > th dose independent rect. 23 14
750 31.23 temperature 15.0 1440 > th dose independent rect. 23 20
765 31.24 temperature 20.0 720 < th dose independent rect. 11 3
766 31.24 atmosphere 1015.0 4320 < th dose independent rect. 16 3
767 31.24 humidity 50.0 43200 < th dose independent rect. 16 6
788 31.24 precipitation 0.1 720 > th dose dependent sin 23 NA
800 31.24 temperature 15.0 30 > th dose dependent rect. 19 23
817 31.25 temperature 15.0 1440 > th dose independent rect. 23 16
818 31.25 temperature 15.0 1440 > th dose independent rect. 23 18
821 31.25 temperature 25.0 4320 > th dose dependent rect. 21 1
849 31.26 humidity 90.0 270 < th dose dependent rect. 9 22
850 31.27 temperature 15.0 4320 > th dose independent rect. 23 1
857 31.27 wind 3.0 14400 > th dose independent rect. 19 12
866 31.27 humidity 80.0 270 > th dose independent rect. 5 22
868 31.27 radiation 40.0 4320 < th dose dependent rect. 12 1
895 31.28 temperature 15.0 1440 > th dose independent rect. 14 15
898 31.28 humidity 50.0 43200 < th dose dependent rect. 16 1
912 31.28 humidity 50.0 90 > th dose dependent rect. 21 22
921 31.29 humidity 50.0 43200 > th dose independent rect. 16 6
925 31.29 humidity 50.0 43200 > th dose independent rect. 16 10
933 31.29 temperature 20.0 720 < th dose dependent rect. 10 3
943 31.29 temperature 10.0 720 > th dose dependent rect. 19 18
951 31.29 humidity 90.0 270 < th dose dependent rect. 16 23
953 31.30 temperature 15.0 1440 < th dose independent rect. 23 3
968 31.30 temperature 15.0 1440 > th dose independent rect. 11 18
971 31.30 humidity 50.0 43200 < th dose dependent rect. 8 1
976 31.30 temperature 15.0 1440 < th dose dependent rect. 23 5
995 31.31 temperature 15.0 1440 < th dose independent rect. 22 5