BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0156500 Os03g0156500|AK103466
         (481 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G66100.1  | chr5:26427639-26429772 FORWARD LENGTH=454          124   9e-29
AT4G35890.1  | chr4:16997433-17000410 FORWARD LENGTH=524          111   1e-24
AT5G21160.3  | chr5:7198817-7203879 REVERSE LENGTH=834            107   1e-23
AT5G46250.1  | chr5:18755388-18758056 FORWARD LENGTH=423           63   3e-10

>AT5G66100.1 | chr5:26427639-26429772 FORWARD LENGTH=454
          Length = 453

 Score =  124 bits (312), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 100/173 (57%), Gaps = 30/173 (17%)

Query: 261 YGAPIGFPEIAPHVYYFTSPLEGVQALPFVPHPASPPA----------MLIPQFDP-LRA 309
           YG PI +P+ A HV              F+PHP+  P           M    FD  L  
Sbjct: 292 YGGPIIYPDYAQHV--------------FMPHPSPDPMGLVGPFPLQPMYFRNFDAILYN 337

Query: 310 ELLKQIEYYFSDDNLCKDIFLRRHMDDQGWVPLPLIAGFNQVKKLTNNVQFILETVLQST 369
           ++L Q+EYYFS DNL +D  LR  M+D+GWVP+ +IA F ++ +LTNN+Q ILE +  S 
Sbjct: 338 KILTQVEYYFSADNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSE 397

Query: 370 VVEVQGDKLRKRERWEIWLLPKQGYSAGNSSGSLSPVTSNIDSLASQFQSVGL 422
           VVE+QG+ LR+R  W+ +LLP++   +G ++G+     SN  SL SQ +S+ L
Sbjct: 398 VVEIQGETLRRRGDWDKYLLPREPSRSGPAAGA-----SNNASLVSQIESMTL 445



>AT4G35890.1 | chr4:16997433-17000410 FORWARD LENGTH=524
          Length = 523

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 19/180 (10%)

Query: 265 IGFP-EIAPHVYYFTSPLEGVQALPFVPHPASPPAMLIPQFDPLRAELLKQIEYYFSDDN 323
           I FP E+A   YY   P          P P  P      Q  PL  +L KQI+YYFSD+N
Sbjct: 333 IPFPTELAQSSYYPRMPY-------MTPIPHGPQFFYHYQDPPLHMKLHKQIQYYFSDEN 385

Query: 324 LCKDIFLRRHMDDQGWVPLPLIAGFNQVKKLTNNVQFILETVLQSTVVEVQGDKLRKRER 383
           L  DI+LR  M+++G+VPL ++AGF +V +LT+N+Q I+E +  S  VEVQGD +RKR+ 
Sbjct: 386 LITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKRDN 445

Query: 384 WEIWLLPKQGYSAGNSSGSLSPVTSNIDSLASQFQSVGLEGA-----GYHASQGMPGEAL 438
           W+ W+L +      N +GS        D++A +  ++ ++ +     G  +SQ  P EAL
Sbjct: 446 WQNWVLRR------NPTGSGPQSVDRADAVAKRLGNLSVDQSSADPIGGSSSQLQPTEAL 499



>AT5G21160.3 | chr5:7198817-7203879 REVERSE LENGTH=834
          Length = 833

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 5/120 (4%)

Query: 274 VYYFTSPLEGVQALP----FVPHPASP-PAMLIPQFDPLRAELLKQIEYYFSDDNLCKDI 328
           VYY   P  G    P    F P+P +  P +L P+   LR  +LKQ+EYYFSD+NL  D 
Sbjct: 240 VYYLPGPPPGAIRGPYPPRFAPYPVNQGPPILSPEKLDLRDRVLKQVEYYFSDENLENDH 299

Query: 329 FLRRHMDDQGWVPLPLIAGFNQVKKLTNNVQFILETVLQSTVVEVQGDKLRKRERWEIWL 388
           +L   MD++GWVP  +IAGF +VK +T +V FI+  +  S  VEVQGD++RKR++W  W+
Sbjct: 300 YLISLMDEEGWVPTKIIAGFKRVKAMTMDVDFIVYALGFSNSVEVQGDQIRKRDKWSDWI 359



>AT5G46250.1 | chr5:18755388-18758056 FORWARD LENGTH=423
          Length = 422

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 293 PASPPAMLIPQFDPLRAELLKQIEYYFSDDNLCKDIFLRRHM--DDQGWVPLPLIAGFNQ 350
           P     +++P  D L  ++++Q+EYYFSD+NL  D FL   M  + +G+VP+  IA F++
Sbjct: 90  PVETDGVVVP-IDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHK 148

Query: 351 VKKLTNNVQFILETVLQSTVVEVQGDKLR 379
           +KKLT +   I+  + +S+ + V  D+ +
Sbjct: 149 MKKLTRDHALIVSALKESSFLVVSADEKK 177



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.315    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,220,777
Number of extensions: 285028
Number of successful extensions: 586
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 587
Number of HSP's successfully gapped: 4
Length of query: 481
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 379
Effective length of database: 8,310,137
Effective search space: 3149541923
Effective search space used: 3149541923
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 114 (48.5 bits)