Os03g0146400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lethal leaf-spot 1 (Fragment).
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Os03g0146400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lethal leaf-spot 1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.83 | 0.369 | 12.7 | 0.719 | 1.32 | -4.76 | 0.23 | 16.8 | -0.0565 | 7.84 | 0.2926 | 671 | -- | -- |
| 69.14 | 0.39 | 12.8 | 0.343 | 1.32 | 0.34 | 0.411 | -- | -0.0161 | 7.85 | 0.2926 | 671 | -- | -- |
| 61.77 | 0.366 | 12.7 | 0.756 | 1.33 | -5.07 | -- | 18.2 | -0.0524 | 7.8 | 0.3545 | 656 | -- | -- |
| 63.6 | 0.371 | 12.8 | 0.461 | 1.32 | -0.514 | -- | -- | -0.052 | 7.78 | 2.504 | 6409 | -- | -- |
| 154.82 | 0.58 | 12.8 | 0.812 | -- | -6.09 | -- | 19.3 | -0.00634 | -- | 0.7073 | 417 | -- | -- |
| 69.26 | 0.39 | 12.8 | 0.348 | 1.32 | -- | 0.41 | -- | -0.017 | 7.84 | -- | -- | -- | -- |
| 69.74 | 0.391 | 12.8 | 0.358 | 1.33 | -- | -- | -- | -0.0178 | 7.8 | -- | -- | -- | -- |
| 157.09 | 0.584 | 12.9 | 0.48 | -- | -0.614 | -- | -- | -0.0311 | -- | 2.453 | 4928 | -- | -- |
| 68.94 | 0.387 | 12.9 | -- | 1.32 | -0.409 | -- | -- | -0.0886 | 7.77 | 2.524 | 5808 | -- | -- |
| 164.92 | 0.6 | 12.9 | 0.374 | -- | -- | -- | -- | 0.000733 | -- | -- | -- | -- | -- |
| 73.12 | 0.4 | 12.8 | -- | 1.33 | -- | -- | -- | -0.0576 | 7.78 | -- | -- | -- | -- |
| 163 | 0.595 | 12.9 | -- | -- | -0.511 | -- | -- | -0.0736 | -- | 2.521 | 4889 | -- | -- |
| 168.61 | 0.606 | 12.9 | -- | -- | -- | -- | -- | -0.0407 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 14 | 59.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 8 |
| 23 | 59.99 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 38 | 60.30 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 14 |
| 42 | 60.34 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 47 | 60.42 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 13 |
| 48 | 60.45 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 10 |
| 53 | 60.51 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 5 | 13 |
| 61 | 60.58 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 8 | 13 |
| 83 | 60.74 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 85 | 60.75 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 90 | 60.79 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 93 | 60.84 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 94 | 60.84 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 101 | 60.87 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 107 | 60.90 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 5 |
| 119 | 60.98 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 22 | NA |
| 123 | 61.03 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 125 | 61.03 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 11 |
| 126 | 61.04 | precipitation | 0.1 | 270 | > th | dose independent | sin | 22 | NA |
| 131 | 61.07 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 132 | 61.07 | temperature | 15.0 | 90 | > th | dose independent | rect. | 19 | 22 |
| 133 | 61.08 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 140 | 61.10 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 155 | 61.17 | temperature | 30.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 162 | 61.19 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 18 |
| 176 | 61.29 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 189 | 61.35 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 196 | 61.38 | wind | 9.0 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 203 | 61.40 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 209 | 61.43 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 211 | 61.44 | humidity | 80.0 | 270 | > th | dose independent | rect. | 8 | 7 |
| 225 | 61.48 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 21 |
| 252 | 61.57 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 254 | 61.57 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 13 |
| 267 | 61.63 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 275 | 61.65 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 8 |
| 286 | 61.68 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 298 | 61.71 | temperature | 15.0 | 720 | > th | dose independent | rect. | 1 | 14 |
| 299 | 61.72 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 311 | 61.77 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 316 | 61.79 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 375 | 61.88 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 386 | 61.90 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 387 | 61.90 | humidity | 80.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 389 | 61.90 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 7 |
| 408 | 61.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 420 | 61.94 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 10 |
| 433 | 61.96 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 1 | 19 |
| 436 | 61.97 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 440 | 61.97 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 446 | 61.98 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 9 | 5 |
| 454 | 61.99 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 485 | 62.02 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 17 |
| 521 | 62.06 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 18 |
| 546 | 62.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 551 | 62.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 558 | 62.09 | temperature | 15.0 | 720 | > th | dose independent | rect. | 18 | 13 |
| 576 | 62.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 582 | 62.11 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 584 | 62.11 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 587 | 62.11 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 8 | 11 |
| 595 | 62.13 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 606 | 62.14 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 642 | 62.18 | wind | 9.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 644 | 62.19 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 681 | 62.23 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 690 | 62.23 | temperature | 15.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 699 | 62.25 | humidity | 80.0 | 270 | > th | dose independent | sin | 0 | NA |
| 700 | 62.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 701 | 62.25 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 739 | 62.28 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 11 |
| 748 | 62.29 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 758 | 62.29 | atmosphere | 1010.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 765 | 62.30 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 774 | 62.30 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 10 |
| 785 | 62.31 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 789 | 62.31 | humidity | 70.0 | 10 | > th | dose dependent | sin | 22 | NA |
| 820 | 62.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 834 | 62.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 851 | 62.35 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 875 | 62.37 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 897 | 62.38 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 900 | 62.38 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 948 | 62.41 | temperature | 15.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 969 | 62.42 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 19 | 22 |