Os03g0143600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Inhibitor of growth protein 1. Splice isoform 2.
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Os03g0143600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Inhibitor of growth protein 1. Splice isoform 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.93 | 0.21 | 11.5 | -0.301 | 0.288 | -0.586 | -0.0582 | -0.298 | -0.0292 | 0.0346 | 28.55 | 15 | -- | -- |
| 20.03 | 0.21 | 11.5 | -0.351 | 0.287 | -0.573 | -0.154 | -- | -0.037 | 24 | 28.9 | 15 | -- | -- |
| 19.93 | 0.21 | 11.5 | -0.285 | 0.29 | -0.583 | -- | -0.366 | -0.0235 | 24 | 28.51 | 14 | -- | -- |
| 20.12 | 0.209 | 11.5 | -0.35 | 0.287 | -0.582 | -- | -- | -0.0408 | 0.0446 | 28.84 | 15 | -- | -- |
| 21.59 | 0.216 | 11.5 | -0.416 | -- | -0.513 | -- | 0.297 | -0.0487 | -- | 29.6 | 791 | -- | -- |
| 24.74 | 0.233 | 11.5 | -0.214 | 0.161 | -- | -0.159 | -- | 0.0798 | 21.6 | -- | -- | -- | -- |
| 24.83 | 0.233 | 11.5 | -0.207 | 0.162 | -- | -- | -- | 0.0803 | 21.4 | -- | -- | -- | -- |
| 21.59 | 0.216 | 11.5 | -0.347 | -- | -0.551 | -- | -- | -0.00441 | -- | 49.08 | 741 | -- | -- |
| 22.98 | 0.224 | 11.5 | -- | 0.247 | -0.437 | -- | -- | 0.026 | 23.5 | 28.84 | 15 | -- | -- |
| 26.37 | 0.24 | 11.5 | -0.207 | -- | -- | -- | -- | 0.0797 | -- | -- | -- | -- | -- |
| 25.96 | 0.238 | 11.5 | -- | 0.162 | -- | -- | -- | 0.103 | 21.3 | -- | -- | -- | -- |
| 24.44 | 0.23 | 11.5 | -- | -- | -0.42 | -- | -- | 0.0507 | -- | 59.74 | 710 | -- | -- |
| 27.49 | 0.245 | 11.5 | -- | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.55 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 2 | 19.57 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 3 | 19.61 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 4 | 19.88 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 11 | 20.01 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 12 | 20.01 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 14 | 20.04 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 17 | 20.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 21 | 20.06 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 22 | 20.06 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 29 | 20.11 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 35 | 20.14 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 37 | 20.15 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 39 | 20.16 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 40 | 20.16 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 42 | 20.17 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 70 | 20.25 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 77 | 20.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 78 | 20.26 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 85 | 20.27 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 90 | 20.29 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 109 | 20.34 | wind | 5.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 111 | 20.34 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 112 | 20.34 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 116 | 20.35 | temperature | 25.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 126 | 20.36 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 131 | 20.36 | temperature | 25.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 145 | 20.40 | temperature | 25.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 154 | 20.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 161 | 20.42 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 189 | 20.46 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 223 | 20.50 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 230 | 20.51 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 11 |
| 261 | 20.55 | wind | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 271 | 20.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 279 | 20.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 296 | 20.57 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 304 | 20.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 333 | 20.60 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 334 | 20.60 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 353 | 20.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 383 | 20.65 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 389 | 20.66 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 393 | 20.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 415 | 20.68 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 423 | 20.69 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 426 | 20.69 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 429 | 20.69 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 431 | 20.70 | wind | 5.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 439 | 20.70 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 443 | 20.70 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 460 | 20.71 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 469 | 20.72 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 495 | 20.74 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 528 | 20.75 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 531 | 20.76 | wind | 5.0 | 14400 | < th | dose independent | sin | 21 | NA |
| 554 | 20.77 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 559 | 20.77 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 583 | 20.79 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 619 | 20.81 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 662 | 20.83 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 755 | 20.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 793 | 20.89 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 874 | 20.93 | humidity | 70.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 885 | 20.94 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 905 | 20.94 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 924 | 20.95 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 7 | 3 |