Os03g0137400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF221 domain containing protein.
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Os03g0137400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF221 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.07 | 0.373 | 7.81 | 0.817 | 0.757 | 0.747 | -0.892 | 1.54 | 0.0536 | 6.6 | 21.48 | 2061 | -- | -- |
| 68.02 | 0.384 | 7.87 | 0.434 | 0.749 | 0.637 | -1.16 | -- | -0.0394 | 6.53 | 21.55 | 1814 | -- | -- |
| 65.05 | 0.376 | 7.81 | 0.821 | 0.756 | 0.754 | -- | 1.62 | 0.059 | 6.57 | 21.5 | 2062 | -- | -- |
| 70.85 | 0.392 | 7.87 | 0.397 | 0.743 | 0.638 | -- | -- | -0.0404 | 6.5 | 21.54 | 1917 | -- | -- |
| 92.07 | 0.447 | 7.83 | 0.84 | -- | 0.757 | -- | 1.56 | 0.0729 | -- | 21.5 | 1378 | -- | -- |
| 79.9 | 0.419 | 7.83 | 0.704 | 0.725 | -- | -1.11 | -- | 0.149 | 6.48 | -- | -- | -- | -- |
| 82.98 | 0.427 | 7.83 | 0.688 | 0.721 | -- | -- | -- | 0.152 | 6.4 | -- | -- | -- | -- |
| 95.97 | 0.456 | 7.9 | 0.45 | -- | 0.628 | -- | -- | -0.0634 | -- | 24.1 | 2779 | -- | -- |
| 74.34 | 0.402 | 7.88 | -- | 0.752 | 0.769 | -- | -- | -0.119 | 6.51 | 21.6 | 1949 | -- | -- |
| 109.98 | 0.49 | 7.84 | 0.706 | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
| 95.44 | 0.457 | 7.84 | -- | 0.73 | -- | -- | -- | 0.0754 | 6.35 | -- | -- | -- | -- |
| 100.38 | 0.467 | 7.89 | -- | -- | 0.761 | -- | -- | -0.105 | -- | 24.1 | 2781 | -- | -- |
| 123.14 | 0.518 | 7.86 | -- | -- | -- | -- | -- | 0.089 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 61.76 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 61.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 3 | 62.09 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 8 | 62.17 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 10 | 62.18 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 11 | 62.20 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 16 | 62.21 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 26 | 62.27 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 34 | 62.33 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 64 | 62.39 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 65 | 62.39 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 77 | 62.47 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 93 | 62.57 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 115 | 62.73 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 120 | 62.77 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 170 | 62.89 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 172 | 62.90 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 202 | 63.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 203 | 63.09 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 21 |
| 204 | 63.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 213 | 63.12 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 8 |
| 221 | 63.18 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 245 | 63.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 252 | 63.36 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 257 | 63.38 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 274 | 63.44 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 282 | 63.50 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 284 | 63.51 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 306 | 63.55 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 308 | 63.57 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 332 | 63.65 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 341 | 63.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 343 | 63.68 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 352 | 63.71 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 366 | 63.73 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 433 | 63.85 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 451 | 63.87 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 459 | 63.89 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 460 | 63.89 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 490 | 63.93 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 555 | 64.04 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 563 | 64.05 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 630 | 64.18 | temperature | 10.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 642 | 64.19 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 643 | 64.19 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 644 | 64.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 709 | 64.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 710 | 64.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 779 | 64.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 810 | 64.43 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 884 | 64.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 998 | 64.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |