BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0137400 Os03g0137400|AK101118
(792 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35870.1 | chr4:16990332-16992785 FORWARD LENGTH=818 854 0.0
AT1G32090.1 | chr1:11540244-11544041 REVERSE LENGTH=807 64 4e-10
AT1G11960.1 | chr1:4039871-4043143 REVERSE LENGTH=772 63 6e-10
AT4G22120.1 | chr4:11715976-11719144 REVERSE LENGTH=772 59 7e-09
AT4G15430.1 | chr4:8828214-8831354 FORWARD LENGTH=762 59 8e-09
AT3G21620.1 | chr3:7611044-7614041 REVERSE LENGTH=757 58 2e-08
AT1G62320.1 | chr1:23041668-23044855 REVERSE LENGTH=770 58 2e-08
AT1G58520.2 | chr1:21729913-21738165 FORWARD LENGTH=1042 56 8e-08
AT4G02900.1 | chr4:1284066-1287747 FORWARD LENGTH=786 54 3e-07
AT1G10090.1 | chr1:3290572-3295271 REVERSE LENGTH=763 51 3e-06
>AT4G35870.1 | chr4:16990332-16992785 FORWARD LENGTH=818
Length = 817
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/781 (55%), Positives = 534/781 (68%), Gaps = 8/781 (1%)
Query: 18 WYGSIQYLVNISAVGAASCVLLFLLVKLRFDHRRIPGPSALAAKLLAVYHATAPQIALHC 77
WYG+IQYL+NIS +G CV +FL VKLR DHRR+PGPSAL +KLLAV+ AT +IA HC
Sbjct: 38 WYGNIQYLLNISVIGLLCCVSIFLFVKLRSDHRRMPGPSALFSKLLAVWKATCREIARHC 97
Query: 78 GADAAQFLLFERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHIPKSSPXX 137
GADAAQFLL E +HI K S
Sbjct: 98 GADAAQFLLIEGGSFVLLFSIAVLAVSVMLPLNLYAGTALLSDELSKTMITHIQKGSALL 157
Query: 138 XXXXXXXXXXXXXXXXGISRMEDALRITRFRXXXXXXXXXXXXXVAVFTIMIQGIPKTLA 197
GI+ +E L+ TRFR AVFTIM+QG+PK L
Sbjct: 158 WLHFVFVVIVVVISHFGIAAIEARLKFTRFRDGNGNISDPNANSTAVFTIMVQGLPKNLG 217
Query: 198 ADKTPLKDYFEHKYPGKVYRVIVPFDLCTLEYLAEEWGKVRNRISWLEARMDARNLFDEF 257
+D+ +D F KYPGKVY+ IVP DLC L+ LA E +VR+ I+WL A+MD+R L DE+
Sbjct: 218 SDRVEFEDCFRLKYPGKVYKFIVPMDLCALDDLATELVRVRDEITWLVAKMDSRLLPDEY 277
Query: 258 AQGGRHSEEHWIVR---RCKELWVMTAERFGFTDEEMLRRLQTKKLVLGSRLSDYKDGRA 314
G + + R K LW ERFGFTD+E LR+LQ + L S+L+ YK+GRA
Sbjct: 278 ENVGDNGLVFCVCSLWVRVKVLWSQITERFGFTDDEKLRKLQELRADLESQLAAYKEGRA 337
Query: 315 PGAGIAFVVFKDVYTANKAVRDFRMERKKTPIGRFFPVMELQLERSRWTVERAPPASDIY 374
GAG+AFV+FKDVYTANKAV+DFR ER + G+FF V EL+L+R++W V+RAP A+DIY
Sbjct: 338 QGAGVAFVMFKDVYTANKAVQDFRNERSRR-TGKFFSVTELRLQRNQWKVDRAPLATDIY 396
Query: 375 WNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARIINVEAMDNAKSWLVW 434
WNHLGL+K +L +RR+ VNT L+L+L+FFSSPLA+IS + SA RI N EA+D+A+ WL W
Sbjct: 397 WNHLGLTKVALIVRRVIVNTILLLILVFFSSPLALISALVSAGRIFNAEALDSAQYWLTW 456
Query: 435 LQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVSGEQRAALLKMVCFFL 494
+Q+S W ++IFQFLPNV IFVSMYI+IPS LSY SKFE HLTVSGEQRAALLKMVCFFL
Sbjct: 457 VQTSGWIGSLIFQFLPNVFIFVSMYIVIPSALSYLSKFERHLTVSGEQRAALLKMVCFFL 516
Query: 495 VNLILLRALVESSLESWILSMGRCYLDSVDCKQIEQYXXXXXXXXXXXXXXXXXITCTFL 554
VNLI+L+ALVESSLES +L M RCYLD DCK+IE+Y IT TFL
Sbjct: 517 VNLIILKALVESSLESALLKMSRCYLDGEDCKRIEEYMSPSFLSRSCVSALAFLITSTFL 576
Query: 555 GISFDLLAPIPWIKHVMKKFRKNDMVQLVPEENEDYQLMHDGEETNNLRAPLMSERE-DS 613
GISFDLLAPIPWIK ++KFRKNDM+QLVPE+NE+Y L + E ++NL PL+ E +S
Sbjct: 577 GISFDLLAPIPWIKKKIQKFRKNDMLQLVPEQNEEYAL-ENQEPSSNLETPLLPENMFES 635
Query: 614 GILNGIE--EHDLSLYPINRSFHMPKQTFDFAQYYAFDITIFALTMIYSLFAPLTVPVGA 671
IE DLS YPI+R+ +PKQ FDFAQYYAF++TIFALTMIYS FAPL VPVGA
Sbjct: 636 PRFGDIEPMSQDLSEYPISRTSPIPKQKFDFAQYYAFNLTIFALTMIYSSFAPLVVPVGA 695
Query: 672 VYFGYRYLVDKYNFLFIYRVRGFPAGNDGKLMDMVICIMQFCVIXXXXXXXXXXXXQGDP 731
VYFGYRY+VDKYNFL++YRVRGFPAGN+GKLMD V+CIM+FCV +GD
Sbjct: 696 VYFGYRYIVDKYNFLYVYRVRGFPAGNEGKLMDTVLCIMRFCVDLYLVSMLLFFSVKGDS 755
Query: 732 MKLQAICTLSLLVFYKLLPSRSDRFQPSLLEGMQTVNSFVDGPTDYEVFSQPDLDWSLYQ 791
KLQAI TL +LV YKLLPS +DR+ P+LL +QTV+S +DGP DYE +S P+ DW Y
Sbjct: 756 TKLQAIFTLGVLVMYKLLPSDTDRYHPALLRSIQTVDSIIDGPVDYEAYSHPNFDWDTYN 815
Query: 792 S 792
+
Sbjct: 816 N 816
>AT1G32090.1 | chr1:11540244-11544041 REVERSE LENGTH=807
Length = 806
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 362 WTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARIIN 421
W AP DIYW +L + SL +R++ + + ++ F+ P+A + + N
Sbjct: 347 WLTSSAPEPRDIYWQNLAIPFISLTIRKLVIGVSVFALVFFYMIPIAFVQSLA------N 400
Query: 422 VEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVSGE 481
+E +D +L + + + + FLP + + + ++ I+P+VL SK E ++ +S
Sbjct: 401 LEGLDRVAPFLRPVTRLDFIKSFLQGFLPGLALKIFLW-ILPTVLLIMSKIEGYIALSTL 459
Query: 482 QRAALLKMVCFFLVNLILLRALVESSLE 509
+R A K F LVN+ L + ++ E
Sbjct: 460 ERRAAAKYYYFMLVNVFLGSIIAGTAFE 487
>AT1G11960.1 | chr1:4039871-4043143 REVERSE LENGTH=772
Length = 771
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 360 SRWTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARI 419
+ W E AP A +++W++L + SL +RR+ ++ + FF P+A + + S
Sbjct: 345 TEWLTEWAPEAREVFWSNLAIPYVSLTVRRLIMHIAFFFLTFFFMIPIAFVQSLAS---- 400
Query: 420 INVEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVS 479
+E ++ +L + + F ++I FLP +++ + + I +PS+L SKFE +++S
Sbjct: 401 --IEGIEKNAPFLKSIIENDLFKSVIQGFLPGIVLKLFL-IFLPSILMVMSKFEGFVSLS 457
Query: 480 GEQRAALLKMVCFFLVNLILLRALVESSLE 509
+R A + F L+N+ L + S+ E
Sbjct: 458 SLERRAAFRYYIFNLINVFLGSVITGSAFE 487
>AT4G22120.1 | chr4:11715976-11719144 REVERSE LENGTH=772
Length = 771
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 360 SRWTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARI 419
++W E AP D++W++L + SL +RR+ ++ + FF P+A + + +
Sbjct: 346 TQWLTEWAPEPRDVFWSNLAIPYVSLTVRRLIMHVAFFFLTFFFIVPIAFVQSLAT---- 401
Query: 420 INVEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVS 479
+E + A +L ++ + ++I FLP + + + + +PS+L SKFE ++S
Sbjct: 402 --IEGIVKAAPFLKFIVDDKFMKSVIQGFLPGIALKLFL-AFLPSILMIMSKFEGFTSIS 458
Query: 480 GEQRAALLKMVCFFLVNLILLRALVESSLE 509
+R A + F LVN+ L + ++ E
Sbjct: 459 SLERRAAFRYYIFNLVNVFLASVIAGAAFE 488
>AT4G15430.1 | chr4:8828214-8831354 FORWARD LENGTH=762
Length = 761
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 360 SRWTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARI 419
+ W E A DIY+++L L L +RR+ V + FF P+A + QS A
Sbjct: 345 TEWLTEWAAEPRDIYYDNLALPYVDLKIRRLIVGVAYFFLTFFFMIPIAFV---QSLA-- 399
Query: 420 INVEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVS 479
N+E ++ A +L L +II FLP + + + + + +P +L SKFE ++ S
Sbjct: 400 -NIEGIEKAFPFLKPLIEVKLLKSIIQGFLPGIALKIFL-LFLPRILMQMSKFEGFVSTS 457
Query: 480 GEQRAALLKMVCFFLVNLIL 499
+R A + F +N+ L
Sbjct: 458 SLERRAATRFYMFQFINVFL 477
>AT3G21620.1 | chr3:7611044-7614041 REVERSE LENGTH=757
Length = 756
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 356 QLERSR----WTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIIS 411
Q ++SR W E AP DIYW++L L L +RR+ + + FF P+A +
Sbjct: 335 QTQQSRNPTEWLTEWAPEPRDIYWDNLALPYVQLTIRRLVIAVAFFFLTFFFMIPIAFVQ 394
Query: 412 GMQSAARIINVEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSK 471
+ N+E ++ A +L L + I FLP + + + + I++PS+L SK
Sbjct: 395 TLA------NIEGIEKAVPFLKPLIEVKTVKSFIQGFLPGIALKIFL-IVLPSILMLMSK 447
Query: 472 FECHLTVSGEQRAALLKMVCFFLVNLILLRALVESSLE 509
FE ++ S +R + F +N+ L + ++L+
Sbjct: 448 FEGFISKSSLERRCASRYYMFQFINVFLCSIIAGTALQ 485
>AT1G62320.1 | chr1:23041668-23044855 REVERSE LENGTH=770
Length = 769
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 360 SRWTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARI 419
+ W E AP A ++YW +L + SL +RR ++ + FF P+A + + S
Sbjct: 343 TEWLTEWAPEAREMYWPNLAMPYVSLTVRRFVMHIAFFFLTFFFIIPIAFVQSLAS---- 398
Query: 420 INVEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVS 479
+E ++ + +L + + ++I FLP +++ + + I +P++L SKFE +++S
Sbjct: 399 --IEGIEKSAPFLSPIVKNKLMKSLIQGFLPGIVLKLFL-IFLPTILMIMSKFEGFISIS 455
Query: 480 GEQRAALLKMVCFFLVNLILLRALVESSLE 509
+R A + F LVN+ L + S+ E
Sbjct: 456 SLERRAAFRYYIFNLVNVFLGSVITGSAFE 485
>AT1G58520.2 | chr1:21729913-21738165 FORWARD LENGTH=1042
Length = 1041
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 362 WTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARIIN 421
W + AP D+YW +L + L +R+IA + + F P+ I G+ +
Sbjct: 624 WVTDLAPEPHDVYWKNLNIPYRQLWIRKIATLVGAVAFMFVFLIPVTFIQGLTQLVQ--- 680
Query: 422 VEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVSGE 481
+ +A +L + S ++ +I +LP+V++ + Y +P ++ YFS E ++ S
Sbjct: 681 ---LSHAFPFLRGILSKNFINQVITGYLPSVILILFFY-AVPPLMMYFSALEGCISRSIR 736
Query: 482 QRAALLKMVCFFLVNLILLRALVES 506
+++A +K++ F + N+ + L S
Sbjct: 737 KKSACIKVLYFTIWNVFFVNILSGS 761
>AT4G02900.1 | chr4:1284066-1287747 FORWARD LENGTH=786
Length = 785
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Query: 362 WTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARIIN 421
W E AP D++W++L + L +RR+ L ++ F P+A + + N
Sbjct: 345 WLTEWAPEPRDVFWDNLAIPYVELSIRRLLTTVALFFLIFCFMIPIAFVQSLA------N 398
Query: 422 VEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVSGE 481
+E + +L + ++I FLP + + + + II+P++L S+ E + ++S
Sbjct: 399 LEGIQKVLPFLKPVIEMKTVKSVIQGFLPGIALKIFL-IILPTILMTMSQIEGYTSLSYL 457
Query: 482 QRAALLKMVCFFLVNLIL 499
R + K F +VN+ L
Sbjct: 458 DRRSAEKYFWFIIVNVFL 475
>AT1G10090.1 | chr1:3290572-3295271 REVERSE LENGTH=763
Length = 762
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 362 WTVERAPPASDIYWNHLGLSKTSLGLRRIAVNTCLILMLLFFSSPLAIISGMQSAARIIN 421
W + AP D++W +L + L +RRIA I + F P+ + G+
Sbjct: 326 WVADLAPEPHDVHWRNLRIPYRQLWMRRIATLVGAIAFMFVFLFPVTFVQGLT------Q 379
Query: 422 VEAMDNAKSWLVWLQSSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHLTVSGE 481
+ + +L L + + +I +LP+V I V + +P ++ YFS E ++ S
Sbjct: 380 LPTLSKNFPFLKDLLNRRFMEQVITGYLPSV-ILVLFFYTVPPLMMYFSTLEGCVSRSQR 438
Query: 482 QRAALLKMVCFFLVNLILLRALVES 506
+++A LK++ F + N+ + L S
Sbjct: 439 KKSACLKILYFTIWNVFFVNILSGS 463
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.140 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,596,356
Number of extensions: 571606
Number of successful extensions: 1541
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 1528
Number of HSP's successfully gapped: 13
Length of query: 792
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 686
Effective length of database: 8,200,473
Effective search space: 5625524478
Effective search space used: 5625524478
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 116 (49.3 bits)