Os03g0133300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0133300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.81 | 0.677 | 9.69 | -1.92 | 3.28 | 3.15 | -1.86 | 0.472 | -0.0827 | 3.49 | 2.979 | 54 | 20.4 | -- |
| 207.62 | 0.671 | 9.69 | -1.92 | 3.37 | 3.16 | -1.68 | -- | -0.083 | 3.51 | 3.03 | 53 | 20.2 | -- |
| 214.97 | 0.683 | 9.69 | -1.9 | 3.44 | 3.08 | -- | -0.886 | -0.0833 | 3.55 | 3.111 | 48 | 20.2 | -- |
| 216.07 | 0.685 | 9.69 | -1.88 | 3.43 | 3.08 | -- | -- | -0.0831 | 3.56 | 3.08 | 48 | 20.1 | -- |
| 278.89 | 0.778 | 9.69 | -1.72 | -- | 4.55 | -- | -0.619 | -0.0778 | -- | 19.28 | 8 | 0.411 | -- |
| 365.83 | 0.897 | 9.71 | -1.9 | 4.6 | -- | -1.12 | -- | -0.209 | 3.62 | -- | -- | -- | -- |
| 369.66 | 0.9 | 9.7 | -1.88 | 4.59 | -- | -- | -- | -0.202 | 3.63 | -- | -- | -- | -- |
| 277.64 | 0.776 | 9.73 | -1.84 | -- | 4.59 | -- | -- | -0.181 | -- | 23.88 | 11 | 0.758 | -- |
| 308.45 | 0.818 | 9.64 | -- | 3.43 | 3.07 | -- | -- | 0.113 | 3.59 | 2.532 | 47 | 20 | -- |
| 1541.65 | 1.83 | 9.71 | -1.69 | -- | -- | -- | -- | -0.0799 | -- | -- | -- | -- | -- |
| 463.11 | 1.01 | 9.66 | -- | 4.56 | -- | -- | -- | 0.00759 | 3.63 | -- | -- | -- | -- |
| 367.32 | 0.893 | 9.68 | -- | -- | 4.56 | -- | -- | 0.0302 | -- | 24.37 | 12 | 0.76 | -- |
| 1617.06 | 1.88 | 9.67 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.09 | radiation | 1.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 3 | 219.88 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 4 | 220.23 | radiation | 1.0 | 30 | > th | dose independent | sin | 2 | NA |
| 8 | 222.85 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 10 | 224.25 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 14 | 228.77 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 16 | 229.39 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 19 | 231.03 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 33 | 234.41 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 21 |
| 38 | 235.09 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 39 | 235.65 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 53 | 238.14 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 70 | 241.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 19 |
| 79 | 242.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 22 |
| 80 | 242.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 81 | 242.60 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 92 | 243.25 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 198 | 251.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 20 |
| 199 | 251.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 206 | 251.59 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 241 | 253.77 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 255 | 254.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 263 | 255.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 14 |
| 264 | 255.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 14 |
| 278 | 255.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 18 |
| 279 | 255.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 282 | 256.03 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 317 | 257.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 319 | 257.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 338 | 258.00 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 20 |
| 340 | 258.09 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 350 | 258.51 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 353 | 258.58 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 367 | 258.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 368 | 258.92 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 373 | 259.13 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 13 | 19 |
| 383 | 259.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 384 | 259.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 385 | 259.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 388 | 259.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 400 | 259.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 406 | 259.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 430 | 259.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 437 | 260.04 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 443 | 260.13 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 445 | 260.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 446 | 260.13 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 450 | 260.13 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 452 | 260.13 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 458 | 260.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 463 | 260.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 482 | 260.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 2 |
| 483 | 260.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 515 | 261.73 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 516 | 261.74 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 524 | 261.89 | radiation | 10.0 | 10 | < th | dose dependent | no | NA | NA |
| 525 | 261.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 2 |
| 529 | 261.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 584 | 263.07 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 585 | 263.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 586 | 263.07 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 589 | 263.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 590 | 263.07 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 594 | 263.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 595 | 263.10 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 608 | 263.30 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 632 | 263.92 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 641 | 264.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 4 |
| 642 | 264.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 688 | 265.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 695 | 265.26 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 2 |
| 696 | 265.27 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 783 | 265.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 20 |
| 813 | 266.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 833 | 266.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 850 | 267.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 877 | 267.14 | radiation | 1.0 | 270 | < th | dose independent | sin | 9 | NA |
| 912 | 267.66 | radiation | 1.0 | 90 | > th | dose independent | rect. | 17 | 23 |
| 939 | 268.17 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 941 | 268.19 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 985 | 268.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 986 | 268.85 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 987 | 268.85 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 988 | 268.85 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 989 | 268.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 993 | 268.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 996 | 269.01 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 23 |