Os03g0131300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
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Os03g0131300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.25 | 0.206 | 12.3 | -0.209 | 0.489 | -1.1 | 0.305 | -0.0249 | 0.102 | 8.6 | 26.93 | 66 | -- | -- |
| 19.25 | 0.204 | 12.3 | -0.212 | 0.489 | -1.1 | 0.31 | -- | 0.102 | 8.6 | 26.97 | 65 | -- | -- |
| 19.54 | 0.206 | 12.3 | -0.186 | 0.49 | -1.11 | -- | -0.113 | 0.103 | 8.55 | 26.92 | 66 | -- | -- |
| 19.56 | 0.206 | 12.3 | -0.205 | 0.489 | -1.1 | -- | -- | 0.1 | 8.54 | 26.98 | 65 | -- | -- |
| 31.05 | 0.261 | 12.3 | -0.17 | -- | -1.16 | -- | -0.197 | 0.103 | -- | 26.92 | 66 | -- | -- |
| 36.29 | 0.282 | 12.2 | 0.0545 | 0.58 | -- | 0.331 | -- | 0.343 | 10.6 | -- | -- | -- | -- |
| 36.75 | 0.284 | 12.2 | 0.0678 | 0.579 | -- | -- | -- | 0.344 | 10.6 | -- | -- | -- | -- |
| 31.09 | 0.261 | 12.3 | -0.202 | -- | -1.15 | -- | -- | 0.0972 | -- | 27.16 | 6 | -- | -- |
| 20.55 | 0.211 | 12.3 | -- | 0.489 | -1.02 | -- | -- | 0.139 | 8.78 | 26.86 | 65 | -- | -- |
| 57.37 | 0.354 | 12.3 | 0.057 | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
| 36.87 | 0.284 | 12.2 | -- | 0.578 | -- | -- | -- | 0.336 | 10.6 | -- | -- | -- | -- |
| 32.1 | 0.265 | 12.3 | -- | -- | -1.1 | -- | -- | 0.13 | -- | 27.15 | 3 | -- | -- |
| 57.45 | 0.354 | 12.3 | -- | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.69 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 2 | 19.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 4 | 20.04 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 20.06 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 6 | 20.06 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 8 | 20.14 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 9 | 20.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 11 | 20.17 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 12 | 20.19 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 13 | 20.19 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 16 | 20.23 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 19 | 20.27 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 26 | 20.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 35 | 20.34 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 36 | 20.35 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 51 | 20.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 73 | 20.77 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 113 | 21.10 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 119 | 21.12 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 148 | 21.41 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 278 | 22.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 359 | 22.53 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 365 | 22.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 368 | 22.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 382 | 22.65 | temperature | 15 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 419 | 22.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 474 | 23.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 475 | 23.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 565 | 23.47 | temperature | 15 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 798 | 24.13 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 916 | 24.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |