Os03g0120200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Remorin, C-terminal region domain containing protein.
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Os03g0120200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Remorin, C-terminal region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.17 | 0.646 | 9.41 | -1.36 | 1.36 | -2.47 | 0.915 | 1.12 | -0.128 | 6.27 | 6.301 | 1376 | 12.1 | -- |
| 185.95 | 0.635 | 9.41 | -1.32 | 2.12 | -3.13 | 1.18 | -- | -0.0993 | 6.38 | 5.627 | 1249 | 12.4 | -- |
| 187.88 | 0.638 | 9.41 | -1.36 | 1.64 | -2.76 | -- | 1.24 | -0.105 | 6.48 | 5.936 | 1332 | 12.2 | -- |
| 189.31 | 0.641 | 9.41 | -1.33 | 2.11 | -3.22 | -- | -- | -0.118 | 6.46 | 5.105 | 1249 | 12.5 | -- |
| 246.19 | 0.731 | 9.46 | -1.34 | -- | -2.16 | -- | 0.574 | -0.128 | -- | 5.896 | 1477 | 12.8 | -- |
| 279.74 | 0.784 | 9.35 | -1.18 | 1.02 | -- | 1.26 | -- | 0.199 | 5.4 | -- | -- | -- | -- |
| 283.69 | 0.789 | 9.36 | -1.18 | 1.02 | -- | -- | -- | 0.194 | 5.45 | -- | -- | -- | -- |
| 246.25 | 0.731 | 9.44 | -1.26 | -- | -2.23 | -- | -- | -0.11 | -- | 5.183 | 1475 | 12.8 | -- |
| 228.16 | 0.704 | 9.41 | -- | 2.22 | -3.06 | -- | -- | -0.0512 | 6.7 | 7.797 | 2638 | 10.8 | -- |
| 338.3 | 0.859 | 9.37 | -1.14 | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
| 320.26 | 0.837 | 9.33 | -- | 1 | -- | -- | -- | 0.325 | 5.5 | -- | -- | -- | -- |
| 276.19 | 0.774 | 9.39 | -- | -- | -2.43 | -- | -- | 0.0139 | -- | 10.01 | 1470 | 11 | -- |
| 372.81 | 0.901 | 9.34 | -- | -- | -- | -- | -- | 0.346 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 194.33 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 4 | 194.90 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 21 | 199.70 | radiation | 10 | 1440 | > th | dose independent | sin | 15 | NA |
| 30 | 200.62 | radiation | 10 | 1440 | < th | dose dependent | sin | 16 | NA |
| 35 | 200.86 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 51 | 201.41 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 52 | 201.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 53 | 201.59 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 18 |
| 70 | 201.81 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 74 | 201.91 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 118 | 202.28 | radiation | 1 | 1440 | < th | dose independent | sin | 15 | NA |
| 151 | 202.63 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 164 | 202.79 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 171 | 202.92 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 174 | 202.96 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 307 | 203.77 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 9 |
| 324 | 203.94 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 371 | 204.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 400 | 204.59 | radiation | 20 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 463 | 204.96 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 500 | 205.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 538 | 205.71 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 551 | 205.79 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 575 | 206.05 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 729 | 206.87 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 786 | 207.35 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 790 | 207.47 | temperature | 25 | 1440 | > th | dose dependent | sin | 16 | NA |
| 800 | 207.54 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 801 | 207.57 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 802 | 207.57 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 810 | 207.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 861 | 207.89 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 879 | 207.99 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 907 | 208.15 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 947 | 208.31 | wind | 9 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 955 | 208.36 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 961 | 208.43 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |