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Os03g0118200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UAA transporter family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0375) R2 : 0.649
β1 : -3.55 (0.146) R2dD : 0.544 R2D : 0.236
β2 : 0.901 (0.0925) R2dC : 0.0741 R2C : 0.0935
β3 : 2.35 (0.129) R2dE : 0.316 R2E : 0.0574
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.369 (0.0831) R2dN8 : 0.0223 R2N8 : -0.0542
σ : 0.694
deviance : 222.26
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C
peak time of C : 2.88
E
wheather : temperature
threshold : 25.99
memory length : 5420
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
215.76 0.69 11.5 -4.31 0.911 2.52 0.914 -2.73 -0.577 3.22 25.9 5364 -- --
224.04 0.697 11.5 -3.56 0.955 2.42 0.474 -- -0.448 2.99 26.28 5652 -- --
218.27 0.688 11.5 -4.28 0.911 2.51 -- -2.55 -0.568 2.99 25.95 5367 -- --
222.26 0.694 11.4 -3.55 0.901 2.35 -- -- -0.369 2.88 25.99 5420 -- --
264.95 0.758 11.5 -4.26 -- 2.7 -- -2.47 -0.583 -- 26.1 5391 -- --
381.21 0.915 11.3 -2.55 1.09 -- 0.842 -- 0.091 2.56 -- -- -- --
383.63 0.917 11.3 -2.57 1.08 -- -- -- 0.0866 2.4 -- -- -- --
268.59 0.763 11.4 -3.56 -- 2.49 -- -- -0.366 -- 25.98 5420 -- --
541.91 1.09 11.3 -- 1.47 0.503 -- -- 0.228 2.46 25.99 5420 -- --
453.19 0.995 11.3 -2.52 -- -- -- -- 0.113 -- -- -- -- --
557.65 1.1 11.3 -- 1.04 -- -- -- 0.373 2.36 -- -- -- --
530.96 1.07 11.3 -- -- 1.38 -- -- 0.228 -- 28.07 2637 -- --
621.19 1.16 11.3 -- -- -- -- -- 0.393 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 202.44 humidity 90 43200 > th dose dependent rect. 22 1
5 204.38 humidity 90 43200 > th dose independent rect. 22 1
18 206.20 humidity 90 43200 < th dose independent rect. 21 2
20 206.27 radiation 40 14400 < th dose dependent rect. 18 9
23 206.53 humidity 90 43200 > th dose independent rect. 18 6
38 207.22 radiation 1 14400 > th dose dependent rect. 17 13
40 207.37 humidity 90 43200 < th dose independent rect. 18 5
47 207.68 humidity 90 43200 < th dose independent rect. 17 8
53 207.80 radiation 40 14400 < th dose dependent rect. 18 7
58 207.88 radiation 40 14400 < th dose dependent rect. 18 1
69 208.12 radiation 40 14400 < th dose dependent rect. 17 13
76 208.19 atmosphere 1005 43200 > th dose independent rect. 16 1
116 208.96 atmosphere 1005 43200 < th dose independent rect. 16 1
125 209.16 radiation 1 14400 > th dose dependent rect. 17 2
146 209.32 humidity 90 43200 < th dose independent rect. 18 1
152 209.39 radiation 10 14400 < th dose independent rect. 16 2
153 209.39 radiation 10 14400 < th dose independent rect. 16 11
163 209.43 radiation 10 14400 < th dose independent rect. 16 7
178 209.61 radiation 30 14400 < th dose independent rect. 15 17
194 209.83 humidity 90 43200 < th dose independent sin 17 NA
200 209.90 humidity 90 43200 > th dose dependent sin 17 NA
201 209.98 humidity 90 43200 > th dose dependent rect. 9 17
203 210.00 humidity 90 43200 < th dose independent rect. 9 17
217 210.13 radiation 1 14400 < th dose dependent rect. 16 11
225 210.17 radiation 1 14400 < th dose dependent rect. 16 9
231 210.21 radiation 1 14400 < th dose dependent rect. 16 3
261 210.53 humidity 90 43200 > th dose independent rect. 9 17
266 210.57 humidity 90 43200 > th dose independent sin 17 NA
303 210.91 radiation 1 14400 < th dose dependent sin 16 NA
310 211.00 radiation 1 14400 < th dose dependent rect. 8 19
319 211.04 radiation 1 14400 < th dose dependent rect. 8 17
326 211.08 radiation 1 14400 < th dose dependent rect. 8 11
360 211.22 humidity 90 43200 > th dose dependent rect. 5 21
414 211.41 radiation 30 14400 < th dose independent rect. 15 12
424 211.44 radiation 30 14400 < th dose independent rect. 15 9
440 211.49 radiation 30 14400 < th dose independent rect. 15 4
444 211.51 radiation 30 14400 < th dose independent rect. 15 2
479 211.67 humidity 90 43200 > th dose independent rect. 18 1
527 211.99 humidity 80 43200 < th dose independent rect. 11 4
529 212.01 humidity 90 43200 > th dose independent rect. 17 20
546 212.07 humidity 90 43200 > th dose dependent rect. 16 21
632 212.43 humidity 90 43200 > th dose dependent no NA NA
638 212.45 radiation 1 14400 < th dose dependent rect. 16 19
670 212.53 humidity 80 43200 > th dose independent rect. 11 7
727 212.71 humidity 80 43200 < th dose independent rect. 11 6
769 212.82 humidity 90 43200 < th dose independent rect. 17 20
782 212.85 radiation 1 14400 > th dose independent rect. 8 11
799 212.87 humidity 80 43200 > th dose dependent rect. 17 2
834 212.99 humidity 90 43200 > th dose independent rect. 1 23
841 213.02 humidity 80 43200 > th dose independent rect. 11 4
844 213.03 humidity 90 43200 > th dose independent no NA NA
885 213.19 radiation 1 14400 < th dose independent rect. 8 19
898 213.22 radiation 1 14400 < th dose independent rect. 8 11
902 213.23 radiation 1 14400 < th dose independent rect. 8 17
910 213.25 radiation 1 14400 < th dose independent rect. 8 15
913 213.25 humidity 90 43200 > th dose independent rect. 20 23
964 213.40 radiation 1 14400 < th dose dependent rect. 21 22
971 213.42 radiation 1 14400 < th dose dependent rect. 5 22
974 213.43 radiation 1 14400 < th dose dependent no NA NA
978 213.43 radiation 1 14400 < th dose dependent rect. 2 22
985 213.44 radiation 1 14400 < th dose dependent rect. 24 19
986 213.44 radiation 1 14400 < th dose dependent rect. 5 20
993 213.45 radiation 1 14400 < th dose dependent rect. 2 17
995 213.45 radiation 1 14400 < th dose dependent rect. 5 18