BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0118200 Os03g0118200|AK064777
(349 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12600.1 | chr1:4286414-4288859 REVERSE LENGTH=350 533 e-152
AT4G23010.3 | chr4:12060318-12062486 REVERSE LENGTH=393 518 e-147
AT5G59740.1 | chr5:24070310-24072747 REVERSE LENGTH=345 80 2e-15
AT1G14360.1 | chr1:4911362-4913029 REVERSE LENGTH=332 79 5e-15
AT2G02810.1 | chr2:801643-803289 FORWARD LENGTH=333 77 1e-14
AT3G46180.1 | chr3:16954671-16956800 REVERSE LENGTH=348 75 6e-14
>AT1G12600.1 | chr1:4286414-4288859 REVERSE LENGTH=350
Length = 349
Score = 533 bits (1372), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/348 (76%), Positives = 301/348 (86%), Gaps = 1/348 (0%)
Query: 2 TGGEEQGRRLFGVSLTDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSFGWYFTFV 61
T EEQ +LFG+ L+D+PRWQQFLICSSGFFFGYLVNGICEEYVYNRL+FS+GWYFTF
Sbjct: 3 TNSEEQMIKLFGIPLSDKPRWQQFLICSSGFFFGYLVNGICEEYVYNRLKFSYGWYFTFA 62
Query: 62 QGFVYLGLIRLQGFTVKQMVNPWRTYVRLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKV 121
QG VY+ LI + GF KQMVNPW+TYV+LS VLMGSHGLTKGSLA+LNYPAQIMFKSTKV
Sbjct: 63 QGLVYIALIYMYGFRTKQMVNPWKTYVKLSGVLMGSHGLTKGSLAYLNYPAQIMFKSTKV 122
Query: 122 LPVMIMGAFIPGLRRKYPFHEYISAVMLVIGLILFTLADAQSSPNFSMIGVAMVSGALVM 181
LPVM+MGAFIPGLRRKYP HEYISA++LVIGLILFTLADA +SPNFS+IGV M+SGAL+M
Sbjct: 123 LPVMVMGAFIPGLRRKYPVHEYISAMLLVIGLILFTLADAHTSPNFSIIGVMMISGALIM 182
Query: 182 DAFLGNLQEAIFKMNPDTTQMEMLFCSTVVGLPFLVVPMVLTGELMRAWTACSQHMYVYA 241
DAFLGNLQEAIF MNP+TTQMEMLFCSTVVGLPFL+ PM+LTGEL AW +C+QH YVY
Sbjct: 183 DAFLGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLLAPMILTGELFTAWNSCAQHPYVYG 242
Query: 242 VLVFEAMATFVGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHVTGLL 301
VLVFEAMATF+GQVSVLSLIALFGAATTAM+TTARKAVTLLLSYLIFTKPLTEQH TGLL
Sbjct: 243 VLVFEAMATFIGQVSVLSLIALFGAATTAMITTARKAVTLLLSYLIFTKPLTEQHGTGLL 302
Query: 302 LISMGIVLKLLLENKENVPRRQVRKTVQHWDDKQREIREVEEEKAPLV 349
LI MGI+LK++ + N +T + + E +E +EE PLV
Sbjct: 303 LIFMGIILKMVPDPNPNPKSSGSGQTPGKLERVKFE-KEDDEESRPLV 349
>AT4G23010.3 | chr4:12060318-12062486 REVERSE LENGTH=393
Length = 392
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 274/395 (69%), Positives = 306/395 (77%), Gaps = 55/395 (13%)
Query: 5 EEQGRRLFGVSLTDRPRWQQFLICSSGFFFGYLVNGICEEYVYNRLQFSFGWYFTFVQGF 64
EEQ R LFG+SL+D+P WQQFLIC+SGFFFGYLVNG+CEEYVYNRLQFSFGWYFTF+QGF
Sbjct: 3 EEQTRSLFGISLSDKPTWQQFLICTSGFFFGYLVNGVCEEYVYNRLQFSFGWYFTFIQGF 62
Query: 65 VYLGLIRLQGFTVKQMVNPWRTYVRLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPV 124
VYL LI LQGFT K +VNP RTYV+LSAVLMGSHGLTKGSLA+LNYPAQIMFKSTKVLPV
Sbjct: 63 VYLFLIYLQGFTTKHIVNPMRTYVKLSAVLMGSHGLTKGSLAYLNYPAQIMFKSTKVLPV 122
Query: 125 MIMGAFIPGLRRKYPFHEYISAVMLVIGLILFTLADAQSSPNFSMIGVAMVSGALVMDAF 184
MIMGAFIPGLRRKYP HEYISA +LV+GLILFTLADAQ SPNFSMIG+ M++GAL+MDAF
Sbjct: 123 MIMGAFIPGLRRKYPVHEYISAFLLVLGLILFTLADAQMSPNFSMIGIMMITGALIMDAF 182
Query: 185 LGNLQEAIFKMNPDTTQMEMLFCSTVVGLPFLVVPMVLTGELMRAWTACSQ--------- 235
LGNLQEAIF MNP+TTQMEMLFCSTVVGLPFL VPMVLTGE+ RAWTAC+Q
Sbjct: 183 LGNLQEAIFTMNPETTQMEMLFCSTVVGLPFLFVPMVLTGEVFRAWTACAQSSILSESDK 242
Query: 236 --------------------------------------HMYVYAVLVFEAMATFVGQVSV 257
H YVY VLVFEAMATF+GQVSV
Sbjct: 243 EWNLLFGFESTSIDLTRFMIQTGVGLSLEKKSKFVGFLHPYVYGVLVFEAMATFIGQVSV 302
Query: 258 LSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHVTGLLLISMGIVLKLL-LENK 316
LSLIALFGAATTA++TTARK VTLLLSYLIFTKPLTEQH +GLLLI+MGIVLK++ +++K
Sbjct: 303 LSLIALFGAATTALITTARKGVTLLLSYLIFTKPLTEQHGSGLLLIAMGIVLKMVPMDSK 362
Query: 317 --ENVPRRQVRKTVQHWDDKQREIREVEEEKAPLV 349
+P R + D RE +EE+ LV
Sbjct: 363 APAKIPARPAVRIAGGDGD-----REEDEERKSLV 392
>AT5G59740.1 | chr5:24070310-24072747 REVERSE LENGTH=345
Length = 344
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 16/248 (6%)
Query: 81 VNPWRTYVRLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPF 140
V P Y +S + + +L ++++P Q + K K++PVM+ G I +++KY
Sbjct: 84 VAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLI--MQKKYKG 141
Query: 141 HEYISAVMLVIG---LILFTLADAQSSPN----FSMIGVAMVSGALVMDAFLGNLQEAIF 193
+Y+ A ++ +G ILF D S N ++ GV++++G L D F Q+ +F
Sbjct: 142 FDYLVAFLVTLGCSVFILFPAGDDVSPYNKGRENTVWGVSLMAGYLGFDGFTSTFQDKLF 201
Query: 194 KMNPDTTQMEM---LFCSTVVGLPFLVVPMVLTGELMRAWTACSQHMYVYAVLVFEAMAT 250
K ME+ +F +T+ ++L G L+ A S H + +
Sbjct: 202 K----GYNMEIHNQIFYTTLCSCVLSFTGLILQGHLLPAVDFVSLHRDCLLDIALLSTVA 257
Query: 251 FVGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHVTGLLLISMGIVLK 310
Q + I FGA T A + T R+ +++LS + F+ PL+ + G +++ + K
Sbjct: 258 TASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYAK 317
Query: 311 LLLENKEN 318
LL NK+N
Sbjct: 318 NLLNNKKN 325
>AT1G14360.1 | chr1:4911362-4913029 REVERSE LENGTH=332
Length = 331
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 125/255 (49%), Gaps = 17/255 (6%)
Query: 83 PWRTYVRLSAVLMGSHGLTKG--SLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPF 140
PW TY SA + + G G +L +++YPAQ++ KS+K++PVM+MG+ + G+R P
Sbjct: 81 PWWTY--WSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGSLVYGIRYTLP- 137
Query: 141 HEYISAVMLVIGLILFTLADAQSS-------PNFSMIGVAMVSGALVMDAFLGNLQEAIF 193
EY+ ++ G+ +F L S PN + +G + L D F Q++I
Sbjct: 138 -EYLCTFLVAGGVSMFALLKTSSKTISKLAHPN-APLGYGLCFLNLAFDGFTNATQDSIT 195
Query: 194 KMNPDTTQMEMLFCSTVVGLPFLVVPM--VLTGELMRAWTACSQHMYVYAVLVFEAMATF 251
P T +++ + G + +V M + G A C QH ++ +
Sbjct: 196 ARYPKTNAWDIMLGMNLWGTIYNMVYMFGLPHGSGFEAVQFCKQHPEAAWDILMYCLCGA 255
Query: 252 VGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHVTGLLLISMGIVLKL 311
VGQ + I+ FG+ +TT RK V++++S ++ PL+ + + ++ G+ ++
Sbjct: 256 VGQNFIFLTISRFGSLANTTITTTRKFVSIVVSSVLSGNPLSSKQWGCVSMVFGGLSYQI 315
Query: 312 LLENKENVPRRQVRK 326
L+ ++ + R Q +K
Sbjct: 316 YLKWRK-LQRMQKKK 329
>AT2G02810.1 | chr2:801643-803289 FORWARD LENGTH=333
Length = 332
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 122/246 (49%), Gaps = 16/246 (6%)
Query: 83 PWRTYVRLSAVLMGSHGLTKG--SLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPF 140
PW TY SA + + G G +L +++YPAQ++ KS+K++PVM+MG + G+R Y F
Sbjct: 81 PWWTY--WSAGITNTIGPAMGIEALKYISYPAQVLAKSSKMIPVMLMGTLVYGIR--YTF 136
Query: 141 HEYISAVMLVIGLILFTLADAQSS-------PNFSMIGVAMVSGALVMDAFLGNLQEAIF 193
EY+ ++ G+ +F L S PN + +G A+ S L D F Q++I
Sbjct: 137 PEYMCTFLVAGGVSIFALLKTSSKTISKLAHPN-APLGYALCSLNLAFDGFTNATQDSIA 195
Query: 194 KMNPDTTQMEMLFCSTVVGLPFLVVPM--VLTGELMRAWTACSQHMYVYAVLVFEAMATF 251
P T +++ + G + ++ M + G +A C H ++ +
Sbjct: 196 SRYPKTEAWDIMLGMNLWGTIYNMIYMFGLPQGIGFKAIQFCKLHPEAAWDILKYCICGA 255
Query: 252 VGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHVTGLLLISMGIVLKL 311
VGQ + I+ FG+ +TT RK V++++S ++ PL+ + + ++ G+ ++
Sbjct: 256 VGQNFIFMTISNFGSLANTTITTTRKFVSIVVSSVMSGNPLSLKQWGCVSMVFGGLAYQI 315
Query: 312 LLENKE 317
L+ K+
Sbjct: 316 YLKWKK 321
>AT3G46180.1 | chr3:16954671-16956800 REVERSE LENGTH=348
Length = 347
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 18/251 (7%)
Query: 81 VNPWRTYVRLSAVLMGSHGLTKGSLAFLNYPAQIMFKSTKVLPVMIMGAFIPGLRRKYPF 140
V P Y +S + + +L ++++P Q + K K++PVM+ G I +++KY
Sbjct: 85 VAPVYKYCLISVTNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLI--MQKKYRG 142
Query: 141 HEYISAVMLVIG---LILFTLADAQSSPN----FSMIGVAMVSGALVMDAFLGNLQEAIF 193
+Y+ A ++ +G ILF D S N ++ GV+++ G L D F Q+ +F
Sbjct: 143 FDYLVAFLVTLGCSVFILFPAGDDISPYNKGRENTVWGVSLMVGYLGFDGFTSTFQDKLF 202
Query: 194 KMNPDTTQMEM---LFCSTVVGLPFLVVPMVLTGELMRAWTACSQHM-YVYAVLVFEAMA 249
K ME+ +F +T+ ++L G L+ A S+H ++ + + +A
Sbjct: 203 K----GYNMEIHNQIFYTTICSSILSFTGLILQGHLLPAVDFVSRHRDCLFDIALLSTVA 258
Query: 250 TFVGQVSVLSLIALFGAATTAMVTTARKAVTLLLSYLIFTKPLTEQHVTGLLLISMGIVL 309
T Q + I FGA T A + T R+ +++LS + F+ PL+ + G +++ +
Sbjct: 259 T-ASQFFISYTIRTFGALTFAAIMTTRQLASIMLSCIWFSHPLSWEQCIGSVIVFGSLYA 317
Query: 310 KLLLENKENVP 320
K ++ K P
Sbjct: 318 KTFVKKKSEKP 328
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.328 0.140 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,832,712
Number of extensions: 263583
Number of successful extensions: 911
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 903
Number of HSP's successfully gapped: 7
Length of query: 349
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 250
Effective length of database: 8,392,385
Effective search space: 2098096250
Effective search space used: 2098096250
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 112 (47.8 bits)