Os03g0115100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mevalonate and galactokinase family protein.
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Os03g0115100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mevalonate and galactokinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.78 | 0.372 | 11.2 | 0.708 | 2.31 | -0.895 | 0.378 | 0.94 | 0.287 | 17.7 | 75 | 1177 | -- | -- |
| 63.78 | 0.372 | 11.2 | 0.643 | 2.31 | -0.798 | 0.358 | -- | 0.281 | 17.7 | 74.67 | 1179 | -- | -- |
| 63.13 | 0.37 | 11.2 | 0.704 | 2.31 | -0.891 | -- | 0.924 | 0.291 | 17.7 | 75.3 | 1177 | -- | -- |
| 64.06 | 0.373 | 11.2 | 0.634 | 2.31 | -0.798 | -- | -- | 0.28 | 17.7 | 75 | 1188 | -- | -- |
| 306.77 | 0.82 | 11.2 | 0.396 | -- | 1.44 | -- | 0.372 | 0.313 | -- | 88 | 1273 | -- | -- |
| 77.96 | 0.414 | 11.2 | 0.488 | 2.35 | -- | 0.312 | -- | 0.333 | 17.5 | -- | -- | -- | -- |
| 78.2 | 0.414 | 11.2 | 0.488 | 2.35 | -- | -- | -- | 0.335 | 17.5 | -- | -- | -- | -- |
| 295.69 | 0.804 | 11.2 | 0.431 | -- | 1.6 | -- | -- | 0.268 | -- | 95 | 4855 | -- | -- |
| 73.99 | 0.401 | 11.2 | -- | 2.3 | -0.722 | -- | -- | 0.265 | 17.7 | 85.09 | 1210 | -- | -- |
| 365.81 | 0.894 | 11.2 | 0.409 | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
| 84.47 | 0.43 | 11.2 | -- | 2.34 | -- | -- | -- | 0.28 | 17.5 | -- | -- | -- | -- |
| 300.56 | 0.81 | 11.2 | -- | -- | 1.62 | -- | -- | 0.22 | -- | 328.9 | 4854 | -- | -- |
| 370.23 | 0.898 | 11.2 | -- | -- | -- | -- | -- | 0.232 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.71 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 8 | 58.20 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 9 | 58.34 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 8 |
| 14 | 58.88 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 21 | 59.47 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 60 | 60.11 | wind | 3.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 61 | 60.31 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 3 |
| 63 | 60.54 | humidity | 70.0 | 720 | < th | dose independent | rect. | 18 | 14 |
| 66 | 60.69 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 67 | 60.71 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 99 | 61.01 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 101 | 61.12 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 103 | 61.17 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 122 | 61.36 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 124 | 61.48 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 134 | 61.61 | wind | 3.0 | 30 | < th | dose dependent | rect. | 3 | 9 |
| 138 | 61.69 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 143 | 61.74 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 165 | 62.13 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 191 | 62.42 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 215 | 62.91 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 2 |
| 222 | 62.95 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 226 | 63.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 260 | 63.28 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 8 |
| 275 | 63.38 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 276 | 63.40 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 299 | 63.48 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 13 |
| 304 | 63.50 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 320 | 63.53 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 324 | 63.55 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 340 | 63.68 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 349 | 63.76 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 350 | 63.77 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 354 | 63.77 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 355 | 63.77 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 360 | 63.79 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 363 | 63.81 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 369 | 63.82 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 372 | 63.82 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 375 | 63.82 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 376 | 63.82 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 411 | 63.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 500 | 64.31 | humidity | 70.0 | 720 | > th | dose independent | sin | 11 | NA |
| 531 | 64.44 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 536 | 64.47 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 575 | 64.60 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 12 |
| 576 | 64.60 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 579 | 64.62 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 2 |
| 580 | 64.62 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 583 | 64.64 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 612 | 64.71 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 623 | 64.74 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 627 | 64.77 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 629 | 64.77 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 630 | 64.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 633 | 64.77 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 634 | 64.77 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 645 | 64.80 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 713 | 65.14 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 722 | 65.19 | humidity | 70.0 | 720 | < th | dose independent | sin | 11 | NA |
| 784 | 65.38 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 786 | 65.39 | humidity | 70.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 788 | 65.39 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 865 | 65.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 887 | 65.66 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 906 | 65.68 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 9 | 20 |
| 907 | 65.68 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 908 | 65.68 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 935 | 65.73 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 941 | 65.75 | wind | 7.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 960 | 65.79 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 14 | 6 |