BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0115100 Os03g0115100|AK121101
         (1072 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G01220.1  | chr1:91750-95552 FORWARD LENGTH=1056              1306   0.0  

>AT1G01220.1 | chr1:91750-95552 FORWARD LENGTH=1056
          Length = 1055

 Score = 1306 bits (3380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1061 (61%), Positives = 796/1061 (75%), Gaps = 31/1061 (2%)

Query: 23   VLRKAWCRLRLSARDPSRVPPWDAVVLTAASPEQAALYDRQLARARRLGRFPASTAALAV 82
            VLRK+W  LRLS R P+RVP WDA+VLTAASPEQA LYD QL RA+R+GR  +ST  LAV
Sbjct: 13   VLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRMGRIASSTVTLAV 72

Query: 83   PDPDAARIGSGAATLHAVASLVRHLIAQASKEEIA-ELLPEASDSSADDIPLSSVVRFMA 141
            PDPD  RIGSGAATL+A+ +L RH       E++  +L PE   ++         VRF++
Sbjct: 73   PDPDGKRIGSGAATLNAIYALARHY------EKLGFDLGPEMEVANG----ACKWVRFIS 122

Query: 142  NKHVLLLHAGGDSKRVPWANPMGKAFLPLPYLAGDNPDGPVPLLFDHILAISSSARQAFK 201
             KHVL+LHAGGDSKRVPWANPMGK FLPLPYLA D+PDGPVPLLFDHILAI+S ARQAF+
Sbjct: 123  AKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAIASCARQAFQ 182

Query: 202  NQGGIFIMTGDVLPCFDASNLVLPDDAACIVTVPTTLDVAANHGVVVAAKDGTDGENYSL 261
            +QGG+FIMTGDVLPCFDA  + LP+DAA IVTVP TLD+A+NHGV+V +K  +  E+Y++
Sbjct: 183  DQGGLFIMTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTSKSESLAESYTV 242

Query: 262  CLVDNLLQKPTVHELVEGQAIRDDGRALLDTGIISARGKAWQELVRLAYSSSHVMIKELI 321
             LV++LLQKPTV +LV+  AI  DGR LLDTGIISARG+AW +LV L   S   MI ELI
Sbjct: 243  SLVNDLLQKPTVEDLVKKDAILHDGRTLLDTGIISARGRAWSDLVALG-CSCQPMILELI 301

Query: 322  TGRKEMSLYEDLVAAWVPSRHEWLRTRPFGMELIAALGKHRMFSFCSYDFSFLHFGTSAE 381
              +KEMSLYEDLVAAWVPSRH+WLRTRP G  L+ +LG+ +M+S+C+YD  FLHFGTS+E
Sbjct: 302  GSKKEMSLYEDLVAAWVPSRHDWLRTRPLGELLVNSLGRQKMYSYCTYDLQFLHFGTSSE 361

Query: 382  VLDHLAGSYSGLVGRRHMSSIPETTACDIAATAVILSSKISAGVSVGEDSLVYDSSLSGR 441
            VLDHL+G  SG+VGRRH+ SIP TT  DIAA++VILSS+I+ GVS+GEDSL+YDS++SG 
Sbjct: 362  VLDHLSGDASGIVGRRHLCSIPATTVSDIAASSVILSSEIAPGVSIGEDSLIYDSTVSGA 421

Query: 442  IRIGSQCIVVGVNIHELHGNRSQIIST--SSYFTLPDRHCLWEVPLVNSVERVMVYCGLH 499
            ++IGSQ IVVG++I       S+ + T  S  F LPDRHCLWEVPLV    RV+VYCGLH
Sbjct: 422  VQIGSQSIVVGIHI------PSEDLGTPESFRFMLPDRHCLWEVPLVGHKGRVIVYCGLH 475

Query: 500  DNPKVSMKKDGTFCGKPWRNVLEHLKIQDTDLWSS-TNEDNCLWNAKLFPVMSLPETLKV 558
            DNPK S+ KDGTFCGKP   VL  L I+++DLWSS   +D CLWNAKLFP+++  E LK+
Sbjct: 476  DNPKNSIHKDGTFCGKPLEKVLFDLGIEESDLWSSYVAQDRCLWNAKLFPILTYSEMLKL 535

Query: 559  GMWLMGSTCDLDGKVASLWKESRRISLEELHRSIDYHQLCVNSSKHQADLATNIAKACMT 618
              WLMG     + +   LW+ S+R+SLEELH SI++ ++C  SS HQADLA  IAKACM 
Sbjct: 536  ASWLMGLDDSRNKEKIKLWRSSQRVSLEELHGSINFPEMCNGSSNHQADLAGGIAKACMN 595

Query: 619  YGLLGRNLFQLCEEMLQKENSCVEVCNELLSLCPSHGDQYSGVLPQSRRYQVKMDLLTAS 678
            YG+LGRNL QLC E+LQKE+  +E+C   L  CP   +Q S +LP+SR YQV++DLL A 
Sbjct: 596  YGMLGRNLSQLCHEILQKESLGLEICKNFLDQCPKFQEQNSKILPKSRAYQVEVDLLRAC 655

Query: 679  GDLSTAAIVEDKVWASIASETASAIKYGXXXXXXXXXXXXNGNLH---------PKKAIV 729
            GD + A  +E KVW ++A ETASA++YG            +   H         P++  V
Sbjct: 656  GDEAKAIELEHKVWGAVAEETASAVRYGFREHLLESSGKSHSENHISHPDRVFQPRRTKV 715

Query: 730  ELPVRVDFVGGWSDTPPWSLERPGCVLNMAIRLEGNLPVGAMIETTMDHLGVLIEDDAGR 789
            ELPVRVDFVGGWSDTPPWSLER G VLNMAI LEG+LP+G +IETT + +G+ I+DDAG 
Sbjct: 716  ELPVRVDFVGGWSDTPPWSLERAGYVLNMAITLEGSLPIGTIIETT-NQMGISIQDDAGN 774

Query: 790  NVCIDDLSSITSPFKENDSFRLVKSALIVTGVLNHERLSKLGLNIRTWANVPRGSGLGTS 849
             + I+D  SI +PF+ ND FRLVKSAL+VTG++    +   GL I+TWANVPRGSGLGTS
Sbjct: 775  ELHIEDPISIKTPFEVNDPFRLVKSALLVTGIVQENFVDSTGLAIKTWANVPRGSGLGTS 834

Query: 850  SILAAAVVKGLFQLIEGDESDATVARAVLVVEQVMXXXXXXXXXXXXLYPGIKCTQSFPG 909
            SILAAAVVKGL Q+  GDES+  +AR VLV+EQ+M            LYPGIK T SFPG
Sbjct: 835  SILAAAVVKGLLQISNGDESNENIARLVLVLEQLMGTGGGWQDQIGGLYPGIKFTSSFPG 894

Query: 910  QPLRLHVVPLLASPQLIQELQQRLLVVFTGQVRLAHRVLQKVVTRYLRRDSLLISSIKRL 969
             P+RL VVPLLASPQLI EL+QRLLVVFTGQVRLAH+VL KVVTRYL+RD+LLISSIKRL
Sbjct: 895  IPMRLQVVPLLASPQLISELEQRLLVVFTGQVRLAHQVLHKVVTRYLQRDNLLISSIKRL 954

Query: 970  AELAKIGREALMNGEIDELGGIMSEAWRLHQELDPFCSNKLVDELFAFADPYCCGYKLVX 1029
             ELAK GREALMN E+DE+G IMSEAWRLHQELDP+CSN+ VD+LF F+ PY  G+KLV 
Sbjct: 955  TELAKSGREALMNCEVDEVGDIMSEAWRLHQELDPYCSNEFVDKLFEFSQPYSSGFKLVG 1014

Query: 1030 XXXXXXXXXXXKNLNSAKELRQALENSATFDVKVYNWNVAM 1070
                       K+   AKELRQ LE  A FDVKVYNW++ +
Sbjct: 1015 AGGGGFSLILAKDAEKAKELRQRLEEHAEFDVKVYNWSICI 1055



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 22,177,657
Number of extensions: 918251
Number of successful extensions: 2120
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2114
Number of HSP's successfully gapped: 1
Length of query: 1072
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 963
Effective length of database: 8,118,225
Effective search space: 7817850675
Effective search space used: 7817850675
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)