Os03g0113900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os03g0113900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 385.95 | 0.923 | 8.83 | 0.161 | 1.94 | -0.212 | -0.178 | -11.7 | -0.41 | 23.5 | 1008 | 10476 | -- | -- |
| 464.63 | 1 | 8.7 | 1.14 | 1.88 | -1.83 | -0.602 | -- | -0.621 | 23.8 | 999.8 | 10938 | -- | -- |
| 386.06 | 0.915 | 8.82 | 0.183 | 1.94 | -0.215 | -- | -11.7 | -0.406 | 23.5 | 1008 | 10445 | -- | -- |
| 455.5 | 0.994 | 8.7 | 1.46 | 1.9 | -2.04 | -- | -- | -0.431 | 23.4 | 1000 | 10983 | -- | -- |
| 620.85 | 1.16 | 8.78 | 0.384 | -- | -0.138 | -- | -11.8 | -0.318 | -- | 1007 | 10454 | -- | -- |
| 551.56 | 1.1 | 8.65 | 1.07 | 1.91 | -- | -0.114 | -- | -0.245 | 23.5 | -- | -- | -- | -- |
| 551.61 | 1.1 | 8.65 | 1.08 | 1.92 | -- | -- | -- | -0.244 | 23.5 | -- | -- | -- | -- |
| 681.76 | 1.22 | 8.65 | 1.53 | -- | -2.03 | -- | -- | -0.409 | -- | 1000 | 11371 | -- | -- |
| 509.59 | 1.05 | 8.72 | -- | 1.92 | -1.76 | -- | -- | -0.55 | 23.5 | 1000 | 10820 | -- | -- |
| 781.78 | 1.31 | 8.61 | 1.13 | -- | -- | -- | -- | -0.224 | -- | -- | -- | -- | -- |
| 582.32 | 1.13 | 8.68 | -- | 1.93 | -- | -- | -- | -0.365 | 23.5 | -- | -- | -- | -- |
| 740.03 | 1.27 | 8.68 | -- | -- | -1.85 | -- | -- | -0.544 | -- | 1001 | 10500 | -- | -- |
| 815.49 | 1.33 | 8.64 | -- | -- | -- | -- | -- | -0.349 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 401.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 405.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 405.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 413.41 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 5 | 414.06 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 7 | 416.75 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 11 | 417.99 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 13 | 418.30 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 16 | 419.01 | wind | 9.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 19 | 419.58 | atmosphere | 1010.0 | 4320 | < th | dose dependent | rect. | 9 | 4 |
| 40 | 420.77 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 43 | 420.89 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 44 | 420.92 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 48 | 421.06 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 50 | 421.17 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 5 |
| 57 | 421.33 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 4 |
| 67 | 421.50 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 69 | 421.52 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 92 | 422.55 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 101 | 422.96 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 104 | 423.16 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 107 | 423.26 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 119 | 423.57 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 5 | 12 |
| 122 | 423.59 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 135 | 423.68 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 144 | 423.78 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 150 | 423.89 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 151 | 423.89 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 153 | 423.93 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 154 | 423.93 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 182 | 424.11 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 183 | 424.13 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 11 | 11 |
| 186 | 424.14 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 15 |
| 204 | 424.34 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 229 | 424.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 247 | 424.77 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 320 | 425.20 | atmosphere | 995.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 354 | 425.45 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 508 | 426.12 | atmosphere | 1010.0 | 4320 | < th | dose dependent | sin | 0 | NA |
| 523 | 426.22 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 561 | 426.29 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 587 | 426.37 | atmosphere | 1010.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 592 | 426.39 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 602 | 426.41 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 607 | 426.41 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 694 | 426.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 742 | 426.95 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 932 | 428.41 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 934 | 428.41 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 943 | 428.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 965 | 428.79 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 981 | 428.89 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 994 | 428.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 998 | 429.02 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 1 |