Os03g0108000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25).
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Os03g0108000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.27 | 0.352 | 10.4 | -0.0502 | 0.97 | 0.532 | 0.176 | 0.505 | 0.00897 | 2.56 | 19.65 | 841 | -- | -- |
| 56.8 | 0.351 | 10.4 | 0.0177 | 0.958 | 0.453 | 0.105 | -- | 0.0246 | 2.59 | 19.7 | 750 | -- | -- |
| 56.37 | 0.35 | 10.4 | -0.0477 | 0.973 | 0.528 | -- | 0.462 | 0.00908 | 2.59 | 19.65 | 858 | -- | -- |
| 56.83 | 0.351 | 10.4 | 0.0122 | 0.961 | 0.449 | -- | -- | 0.0219 | 2.59 | 19.65 | 771 | -- | -- |
| 108.43 | 0.488 | 10.4 | -0.0386 | -- | 0.294 | -- | 0.0115 | 0.00882 | -- | 19.65 | 858 | -- | -- |
| 61.19 | 0.367 | 10.4 | -0.15 | 0.933 | -- | 0.0991 | -- | -0.0596 | 2.8 | -- | -- | -- | -- |
| 61.22 | 0.366 | 10.4 | -0.152 | 0.933 | -- | -- | -- | -0.0602 | 2.81 | -- | -- | -- | -- |
| 75.5 | 0.405 | 10.4 | 0.00864 | -- | 0.607 | -- | -- | 0.0951 | -- | 26.3 | 9 | -- | -- |
| 56.83 | 0.351 | 10.4 | -- | 0.96 | 0.444 | -- | -- | 0.0197 | 2.59 | 19.63 | 771 | -- | -- |
| 111.66 | 0.494 | 10.4 | -0.112 | -- | -- | -- | -- | -0.0364 | -- | -- | -- | -- | -- |
| 61.83 | 0.368 | 10.4 | -- | 0.93 | -- | -- | -- | -0.0433 | 2.81 | -- | -- | -- | -- |
| 75.41 | 0.404 | 10.4 | -- | -- | 0.613 | -- | -- | 0.117 | -- | 26.38 | 8 | -- | -- |
| 111.99 | 0.494 | 10.4 | -- | -- | -- | -- | -- | -0.0239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 7 |
| 5 | 50.96 | temperature | 15 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 6 | 51.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 8 |
| 53 | 51.83 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 62 | 51.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 67 | 51.90 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 78 | 51.98 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 14 |
| 104 | 52.13 | temperature | 25 | 270 | < th | dose dependent | sin | 3 | NA |
| 174 | 52.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 24 | 15 |
| 208 | 52.65 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 6 |
| 209 | 52.65 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 236 | 52.75 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 303 | 53.02 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 11 |
| 319 | 53.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 386 | 53.25 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 466 | 53.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 9 |
| 503 | 53.54 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 578 | 53.74 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 650 | 53.90 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 874 | 54.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 1 |