Os03g0107300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Citrate transporter family protein.
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Os03g0107300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Citrate transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.34 | 0.383 | 3 | 0.148 | 0.148 | 3.61 | 0.201 | 10.2 | -0.0033 | 5.38 | 9.204 | 3 | -- | -- |
| 84.03 | 0.427 | 2.99 | 0.171 | 0.133 | 1.88 | 0.167 | -- | 0.00206 | 3.07 | 9.3 | 3 | -- | -- |
| 66.44 | 0.38 | 3 | 0.149 | 0.149 | 3.62 | -- | 10.2 | -0.00391 | 5.28 | 9.204 | 3 | -- | -- |
| 82.88 | 0.424 | 2.99 | 0.138 | 0.187 | 1.73 | -- | -- | 0.00513 | 5.93 | 9.2 | 3 | -- | -- |
| 67.6 | 0.383 | 3 | 0.153 | -- | 3.62 | -- | 10.3 | 0.000946 | -- | 9.2 | 3 | -- | -- |
| 91.69 | 0.449 | 2.99 | 0.102 | 0.17 | -- | 0.188 | -- | -0.0155 | 6.02 | -- | -- | -- | -- |
| 91.77 | 0.449 | 2.99 | 0.103 | 0.171 | -- | -- | -- | -0.0163 | 5.86 | -- | -- | -- | -- |
| 84.71 | 0.429 | 2.99 | 0.15 | -- | 1.7 | -- | -- | 0.0065 | -- | 9.201 | 3 | -- | -- |
| 83.42 | 0.425 | 2.99 | -- | 0.191 | 1.71 | -- | -- | -0.0115 | 5.89 | 9.2 | 3 | -- | -- |
| 93.28 | 0.451 | 2.99 | 0.108 | -- | -- | -- | -- | -0.0123 | -- | -- | -- | -- | -- |
| 92.05 | 0.449 | 2.99 | -- | 0.172 | -- | -- | -- | -0.0278 | 5.83 | -- | -- | -- | -- |
| 85.3 | 0.43 | 2.99 | -- | -- | 1.67 | -- | -- | -0.0104 | -- | 9.219 | 3 | -- | -- |
| 93.59 | 0.452 | 3 | -- | -- | -- | -- | -- | -0.0244 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.10 | wind | 9 | 30 | > th | dose independent | rect. | 1 | 10 |
| 5 | 63.10 | wind | 9 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 9 | 63.11 | wind | 9 | 10 | > th | dose independent | rect. | 19 | 16 |
| 10 | 63.11 | wind | 9 | 10 | > th | dose dependent | rect. | 19 | 16 |
| 11 | 63.12 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 15 | 63.12 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 19 | 63.12 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 23 | 63.12 | humidity | 60 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 356 | 74.89 | wind | 9 | 10 | > th | dose independent | sin | 9 | NA |
| 358 | 75.06 | wind | 9 | 10 | < th | dose independent | sin | 8 | NA |
| 382 | 77.07 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 4 | 1 |
| 385 | 77.08 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 432 | 78.90 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 488 | 80.92 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 1 |
| 540 | 81.68 | wind | 9 | 10 | > th | dose dependent | sin | 9 | NA |
| 648 | 82.67 | temperature | 25 | 270 | > th | dose independent | rect. | 2 | 3 |
| 690 | 82.85 | temperature | 25 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 829 | 83.64 | wind | 9 | 10 | > th | dose independent | no | NA | NA |
| 925 | 83.84 | wind | 1 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 979 | 84.40 | wind | 5 | 10 | > th | dose dependent | sin | 6 | NA |