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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0105800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.45 (0.046) R2 : 0.589
β1 : -3.93 (0.17) R2dD : 0.514 R2D : 0.306
β2 : 0.726 (0.12) R2dC : 0.0335 R2C : -0.0115
β3 : -1.5 (0.14) R2dE : 0.111 R2E : -0.029
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.21 (0.0998) R2dN8 : 0.186 R2N8 : -0.0062
σ : 0.856
deviance : 337.97
__
_____
C
peak time of C : 6.27
E
wheather : humidity
threshold : 71.39
memory length : 1209
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
335.99 0.861 5.45 -3.96 0.719 -1.56 -0.981 0.273 -1.23 6.79 71.01 1209 -- --
336.13 0.854 5.45 -3.92 0.72 -1.54 -0.953 -- -1.22 6.75 71.25 1209 -- --
337.89 0.856 5.45 -3.96 0.723 -1.51 -- 0.204 -1.22 6.24 71.55 1212 -- --
337.97 0.856 5.45 -3.93 0.726 -1.5 -- -- -1.21 6.27 71.39 1209 -- --
363.77 0.888 5.47 -3.97 -- -1.56 -- 0.34 -1.22 -- 71.42 1239 -- --
414.46 0.954 5.4 -3.62 0.847 -- 0.422 -- -1 4.31 -- -- -- --
414.8 0.954 5.4 -3.63 0.855 -- -- -- -1 4.53 -- -- -- --
363.96 0.889 5.46 -3.92 -- -1.54 -- -- -1.21 -- 71.56 1239 -- --
701.61 1.23 5.36 -- 0.561 -1.9 -- -- -0.818 6 88 1319 -- --
453.8 0.995 5.41 -3.59 -- -- -- -- -0.98 -- -- -- -- --
761.54 1.29 5.31 -- 0.787 -- -- -- -0.598 4.64 -- -- -- --
719.31 1.25 5.38 -- -- -2.02 -- -- -0.829 -- 87.63 1314 -- --
794.52 1.32 5.32 -- -- -- -- -- -0.581 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 336.48 temperature 25 720 > th dose dependent rect. 18 5
9 339.62 humidity 70 1440 > th dose independent rect. 17 20
10 339.81 temperature 25 720 > th dose dependent rect. 20 3
12 340.02 temperature 25 720 > th dose dependent rect. 20 1
16 340.22 humidity 80 720 < th dose dependent rect. 18 3
19 340.37 radiation 10 1440 > th dose independent rect. 15 17
29 341.16 humidity 70 1440 > th dose independent sin 10 NA
38 341.76 humidity 80 1440 < th dose dependent rect. 16 21
40 341.83 humidity 70 720 > th dose independent rect. 19 8
45 342.17 radiation 10 1440 > th dose independent sin 12 NA
46 342.19 humidity 70 1440 < th dose independent rect. 17 20
52 342.64 radiation 10 1440 > th dose independent rect. 15 21
57 343.25 humidity 70 1440 < th dose independent sin 11 NA
69 343.48 atmosphere 995 43200 > th dose independent rect. 15 22
74 343.83 atmosphere 995 43200 < th dose dependent rect. 14 11
75 343.89 radiation 20 1440 > th dose dependent rect. 16 16
77 343.90 humidity 70 1440 < th dose independent rect. 17 17
83 344.08 atmosphere 995 43200 < th dose independent rect. 15 21
94 344.71 atmosphere 995 43200 > th dose independent rect. 20 21
99 344.79 humidity 70 1440 > th dose independent rect. 18 14
101 344.86 humidity 70 1440 < th dose independent rect. 17 15
102 344.91 atmosphere 995 43200 < th dose independent rect. 9 21
105 344.93 humidity 80 1440 < th dose dependent rect. 6 15
166 345.31 humidity 80 1440 < th dose dependent rect. 11 23
178 345.37 humidity 80 1440 < th dose dependent no NA NA
195 345.50 atmosphere 995 43200 > th dose independent rect. 13 23
211 345.63 atmosphere 995 43200 > th dose independent rect. 8 23
216 345.65 radiation 20 1440 < th dose dependent rect. 15 16
218 345.68 radiation 20 1440 < th dose independent rect. 16 1
220 345.76 radiation 20 1440 < th dose independent rect. 16 5
222 345.79 atmosphere 995 43200 > th dose independent no NA NA
224 345.80 humidity 80 1440 < th dose dependent rect. 20 23
252 346.03 humidity 70 720 < th dose independent rect. 18 2
293 346.31 radiation 20 1440 < th dose independent rect. 16 12
299 346.36 atmosphere 995 43200 < th dose independent rect. 21 21
307 346.39 atmosphere 995 43200 < th dose independent no NA NA
355 346.94 radiation 20 1440 < th dose independent rect. 16 15
365 347.02 atmosphere 995 43200 > th dose independent rect. 1 23
367 347.02 atmosphere 995 43200 > th dose independent rect. 4 23
386 347.21 humidity 80 1440 < th dose dependent sin 21 NA
431 347.46 humidity 80 1440 < th dose dependent sin 10 NA
466 347.75 radiation 20 1440 < th dose dependent rect. 15 3
481 347.77 humidity 70 1440 > th dose independent rect. 18 3
488 347.81 radiation 20 1440 < th dose dependent rect. 16 1
490 347.82 humidity 70 1440 > th dose independent rect. 18 10
500 347.87 radiation 10 1440 > th dose independent rect. 15 2
502 347.88 atmosphere 995 43200 < th dose independent rect. 1 23
565 348.25 radiation 10 1440 > th dose independent rect. 11 22
568 348.31 radiation 20 1440 < th dose dependent sin 13 NA
571 348.33 radiation 40 1440 < th dose dependent rect. 16 1
629 348.74 radiation 20 1440 < th dose dependent rect. 15 13
633 348.79 radiation 1 1440 > th dose dependent rect. 16 1
637 348.81 radiation 20 1440 < th dose dependent rect. 15 10
650 348.86 radiation 10 1440 < th dose dependent rect. 11 20
657 348.90 radiation 20 4320 > th dose dependent rect. 7 1
658 348.91 radiation 20 1440 < th dose dependent rect. 15 6
669 348.97 humidity 70 1440 < th dose dependent rect. 16 1
700 349.04 temperature 25 720 > th dose dependent sin 13 NA
737 349.23 radiation 30 4320 < th dose independent rect. 7 1
794 349.58 humidity 80 720 < th dose dependent rect. 18 14
804 349.62 humidity 70 1440 > th dose independent rect. 9 23
849 349.88 radiation 10 1440 > th dose dependent sin 12 NA
854 349.91 humidity 80 1440 < th dose independent rect. 6 8
872 350.01 humidity 60 1440 > th dose independent rect. 11 8
894 350.14 humidity 70 1440 > th dose independent rect. 6 22
897 350.15 humidity 70 1440 > th dose independent rect. 6 19
912 350.18 humidity 70 1440 > th dose independent rect. 6 15
913 350.18 humidity 70 1440 > th dose independent rect. 24 21
914 350.18 humidity 70 1440 > th dose independent rect. 2 23
925 350.20 humidity 70 1440 > th dose independent no NA NA
939 350.21 humidity 70 1440 > th dose independent rect. 2 19
996 350.27 humidity 70 1440 > th dose independent rect. 9 19