BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0105800 Os03g0105800|AK066875
(749 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11450.1 | chr4:6959065-6961223 REVERSE LENGTH=695 239 5e-63
AT1G63520.1 | chr1:23560205-23561873 FORWARD LENGTH=529 183 3e-46
AT5G59020.1 | chr5:23827160-23829603 REVERSE LENGTH=781 107 2e-23
AT2G29510.1 | chr2:12635231-12637838 FORWARD LENGTH=840 89 1e-17
AT5G01030.1 | chr5:10638-13003 FORWARD LENGTH=745 87 4e-17
AT1G04490.1 | chr1:1218020-1219325 REVERSE LENGTH=402 83 5e-16
AT2G33360.1 | chr2:14140901-14142870 FORWARD LENGTH=604 82 8e-16
AT2G37930.1 | chr2:15873284-15874770 FORWARD LENGTH=468 74 3e-13
>AT4G11450.1 | chr4:6959065-6961223 REVERSE LENGTH=695
Length = 694
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 276/544 (50%), Gaps = 76/544 (13%)
Query: 252 LPESMSAKVSISDGTRPSESVRHGIENSTKVRSSPFKKILDPIMKSKSIRSP--SLMEDS 309
LP+ SAKV +E S SS +K+ DP +KSKS+RSP + E
Sbjct: 181 LPKPYSAKVD-------------SVETSYNKDSSRVRKMFDPFVKSKSLRSPLGYIGESG 227
Query: 310 NHVTMPVNRKNCVXXXXXXXXXXXXEQSQSINCQLNGERQHTTNAL--SPAHLQAVLKLD 367
+ + N + C +S C + T+ L SP HL LK++
Sbjct: 228 DQFKLGRNSERCRSMLSDYSNI----HKRSNLCPPPVVNKDYTSVLKSSPVHLHCRLKME 283
Query: 368 TKNGIPVFEFCVKGPEESISARSWKTGNDLNWIYTFHSGG--KRASATGRASKDGRWCSP 425
+KNG+PVF+F PEE +A++WK+ N W+YTF S G KR+SA+ R D S
Sbjct: 284 SKNGLPVFQFVSDSPEEVYAAKTWKSDNGSTWVYTFSSAGSRKRSSASVRGLTDVSKESL 343
Query: 426 PIVGQMQASSYLCSEVGKDGVLTNSV-ITEFVLYDIAHARQSFSA-EEKTQCTETTQSTL 483
+V QMQ + +CSEV K G ++ + EFVLYDIA AR+S S E+++ +T +
Sbjct: 344 -LVAQMQVTCKMCSEVRKKGQDPETLMVNEFVLYDIAQARRSVSTKEDQSLPLDTVNNAS 402
Query: 484 SSAVE-------KSASGDCPQRINLMDQQNSARNNSDVSTSC---PWSEEDLYPHLEIAA 533
++V+ S SGD + Q + D+ S PWS +L+P LEIAA
Sbjct: 403 KNSVKSDSEIRNNSMSGDASDTMKQRSQPKRTSQSYDLEASNGTNPWSAANLHPDLEIAA 462
Query: 534 TVIQVPFNRSKSKELKSG------------LSP--------------GTVKVITPSGLHG 567
+IQ + +S + + G LSP +KV+ P G HG
Sbjct: 463 IIIQDTIEKRESLKYRRGDKRLMEKTNILGLSPIEEEKKELFGSRSLEKLKVVIPRGNHG 522
Query: 568 LPNDDETSPSPLLDRWRYGGGCDCGGWDMACPIAVLGNAYDNNWANSVTKEGENPMELFV 627
LP + + PSPL+ RWR GGGCDCGGWDMACP+ VLGN + + E ++P++LFV
Sbjct: 523 LPTTENSCPSPLIQRWRSGGGCDCGGWDMACPLMVLGNPRISCSHDQPLVENQHPLQLFV 582
Query: 628 LSKNEQVVIFFEQGGKEELPALSIKGNEKGQLLVHFHARLSAMQAFSTCISLLHCSEAST 687
QG KE +PAL + E+GQ VHFHA+LS +QAFS C+++LH +E S
Sbjct: 583 ------------QGAKEHIPALYMSFVEEGQYDVHFHAQLSTLQAFSICVAILHNTEVSD 630
Query: 688 AV-SIEKGKHKLYSSSLKMLLEEEVSQLIEAVTAXXXXXXXXXXXXXXXXVVL-DPPFSP 745
+ + E + + +SLKML++++V L+EAVT + +PPFSP
Sbjct: 631 SYRNGENVQQFSHCNSLKMLIDDDVQFLVEAVTEEEEVPKPLKEAVTALQSYMPNPPFSP 690
Query: 746 MGRV 749
+ RV
Sbjct: 691 ISRV 694
>AT1G63520.1 | chr1:23560205-23561873 FORWARD LENGTH=529
Length = 528
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 189/373 (50%), Gaps = 43/373 (11%)
Query: 346 GERQHTTNALSPAHLQAVLKLDTKNGIPVFEFCVKGPEESISARSWKTGNDLNWIYTFHS 405
G+ + N SP HL A L+++ + G+PVF F + P++ A + + ++Y+F
Sbjct: 169 GQEMFSRNKSSPVHLHAHLRMEYELGMPVFIFSLDLPDDVYMASTRMDDKESRFVYSFSY 228
Query: 406 GGKRASATGRASKDGRWCSPPIVGQMQASSYLCSEV-GKDGVLTNSVITEFVLYDIAHAR 464
G GR++K+ ++GQMQ S+ +C E + L S ++EFVL+DIA AR
Sbjct: 229 IG------GRSNKNVSGKESSLIGQMQVSTQICLEQEPYEEDLVASTVSEFVLFDIARAR 282
Query: 465 QS-FSAEEKTQCTETTQSTLSSAVEKSASGDCPQRINLMDQQN-----SARNNSDVSTSC 518
+S F E ++ + + S E S S +++ + N S +S+ + S
Sbjct: 283 RSGFKHENLSRQNSFRRGLIFSETENSVSDLLQEKLPRQNSFNRGLTRSLSKHSENTASG 342
Query: 519 PWSEEDLYPHLEIAATVIQVPFNRSKSKELKSGLSPGTVKVITPSGLHGLPNDDETSPSP 578
PW DL+P LEIAA VIQ S LS +KVI P+G HGLP+ + + P+P
Sbjct: 343 PWPVSDLHPGLEIAAIVIQ-------DSSSNSKLSSREMKVIVPTGNHGLPDTENSCPTP 395
Query: 579 LLDRWRYGGGCDCGGWDMACPIAVLGNAYDNNWANSVTKEGENPMELFVLSKNEQVVIFF 638
+L RWR GGGCDC GWDM C + VL E+P L N + F
Sbjct: 396 ILQRWRSGGGCDCSGWDMGCHLFVL----------------ESP----ELINNHHGLELF 435
Query: 639 EQGGKEELPALSIKGNEKGQLLVHFHARLSAMQAFSTCISLLHCSEASTAVSIEKGKHKL 698
+ GKE PA+++ +G V FHA+LSA+QAFS C++ L +E S E+
Sbjct: 436 IESGKEITPAMTMTCIREGHYEVKFHAKLSALQAFSICVAELQRTEVSRG---ERNISLS 492
Query: 699 YSSSLKMLLEEEV 711
SSL+ L+E E
Sbjct: 493 RCSSLRELIEMET 505
>AT5G59020.1 | chr5:23827160-23829603 REVERSE LENGTH=781
Length = 780
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 173/409 (42%), Gaps = 91/409 (22%)
Query: 355 LSPAHLQAVLKLDTKNGIPVFEFCVKGPEESISARSWKTGN----DLNWIYTFHSGGKRA 410
L + ++AVL++ KN P+F F V + I+A K G+ + +YTF S
Sbjct: 449 LGSSMVRAVLRVTVKNNQPLFTFAVNKETDIIAATQKKMGSSEEGECTSVYTFFSIKDHK 508
Query: 411 SATG----RASKDGRWCSPPIVGQMQASSYLCSEVGKDGVLTNSVITEFVLYDIAHARQS 466
+G R S +V QM+ SS L S I EFVL+ + R+S
Sbjct: 509 RNSGWLNQRGSGQTHGLISNVVAQMRVSSSLPS----------GSIREFVLFSVELDRES 558
Query: 467 FSAEEKTQCTETTQSTLSSAVEKSASGDCPQRINLMDQQNSARNNSDVSTSCPWSEEDLY 526
EK+ ++ L++ + K P+ + N+ ++++ S +D +
Sbjct: 559 ---TEKSDL--QLKNELAAIIVK-----MPRLFHRRAPLNTVQDHNATSGELEDHIKDKF 608
Query: 527 PHLEIAATVIQVPFNRSKSKELKSGLSPGTVKVITPSGLHGLPNDDETSPSPLLDRWRYG 586
+I+AT VI SG+H +P + PS L+ RWR G
Sbjct: 609 FDQDISAT------------------------VILQSGVHSMP--QKGGPSSLIQRWRTG 642
Query: 587 GGCDCGGWDMACPIAVLGNAYDNNWANSVTKE---GENPMELFVLSKNEQVVIFFEQGGK 643
G CDCGGWDM C + +L N ++ ++ S T N ELF L EQ
Sbjct: 643 GSCDCGGWDMGCNLRILTNQHNLSYKKSATSNSPPSSNRFELFFLG---------EQA-- 691
Query: 644 EELPALSIKGNEKGQLLVHFHARLSAMQAFSTCISLLHCSEASTAVSIEKG---KHKLYS 700
EE P LS K ++G V +++ LS +QAFS C++L + S + +K +HK+
Sbjct: 692 EEHPFLSFKPIKEGIYSVAYNSSLSQLQAFSICMALAESRKMSENILEQKSSCDEHKVRG 751
Query: 701 SSLKMLLEEEVSQLIEAVTAXXXXXXXXXXXXXXXXVVLDPPFSPMGRV 749
++ LL ++ S V P FSP+GRV
Sbjct: 752 KTV--LLPDQDSN------------------PNGNTVGYQPRFSPVGRV 780
>AT2G29510.1 | chr2:12635231-12637838 FORWARD LENGTH=840
Length = 839
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 182/481 (37%), Gaps = 126/481 (26%)
Query: 283 RSSPFKKILDPIMKSKSIRSPSLMEDSNHVTMPVNRKNCVXXXXXXXXXXXXEQSQSINC 342
RSSP +++LDP++K KS S C + S S
Sbjct: 471 RSSPLRRLLDPLIKPKSSHS------------------CRSPEPSLKEAPSSQPSSSSFL 512
Query: 343 QLNGERQHTTNALSPAHLQAVLKLDTKNGIPVFEFCVKGPEESISARSWKT-----GNDL 397
NG+ + +QA+ ++ +KN P+F F V+ E+SI+A + + D
Sbjct: 513 SRNGKS---------STVQALFRVTSKNDQPLFTFAVEK-EQSITAATIRKQTLPEKEDY 562
Query: 398 NWIYTFHSGGKRASATGRASKDGRWCSPPIVGQMQASSYLCSEVGKDGVLTNSVITEFVL 457
YTF + K+ +W + ++Q+ Y T++++ + +
Sbjct: 563 GHKYTFFT------VQEVQKKNAKWMN--NSRKVQSQEY-----------TSNIVAQMRV 603
Query: 458 YDIAHARQSFSAEEKTQCTETTQSTLSSAVEKSASGDCPQRINLMDQQNSARNNSDVSTS 517
D + F A E++ T+ + A E QR N
Sbjct: 604 SD---PKPLFLAGERSAENLLTREFVLVASES-------QRTN----------------- 636
Query: 518 CPWSEEDLYPHLEIAATVIQVPFNRSKSKELKSG--LSPGTVKVITPSGLHGLPNDDETS 575
E+AA VI++P + G + V+ PSG+H LP+ +
Sbjct: 637 ------------ELAAMVIKIPKLTDTTSSTTLGDYFAEVNATVVLPSGVHSLPH--KGG 682
Query: 576 PSPLLDRWRYGGGCDCGGWDMACPIAVLGNAYDNNWANSVTKEGENPMELFVLSKNEQVV 635
PS L+ RW+ G CDCGGWD C + +L N ++ S T ++
Sbjct: 683 PSSLIQRWKSDGSCDCGGWDTGCNLRILTNQHNKPINPSPT-------------TSDAFK 729
Query: 636 IFFEQGGKEE---LPALSIKGNEKGQLLVHFHARLSAMQAFSTCISLLHCSEASTAVSIE 692
+FF QGG +E P LS +G V ++ LS +QAFS CI++ ++E
Sbjct: 730 LFF-QGGVQENNNQPYLSFTTYREGVYAVEYNTSLSLLQAFSICIAVNEGRNPLIKTTVE 788
Query: 693 ----KGKHKLYSSSLKMLLEEEVSQLIEAVTAXXXXXXXXXXXXXXXXVVLDPPFSPMGR 748
+ + K Y + + E + + A + PP SP+GR
Sbjct: 789 PNTSRVEKKAYGGEMSSIQNENLKSFSGPIEA----------EAPARYLSHHPPLSPVGR 838
Query: 749 V 749
V
Sbjct: 839 V 839
>AT5G01030.1 | chr5:10638-13003 FORWARD LENGTH=745
Length = 744
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 29/156 (18%)
Query: 530 EIAATVIQVPFNRSKSKELKSGLSPGTVKVITPSGLHGLPNDDETSPSPLLDRWRYGGGC 589
E+AA VI+ K S S VI P G+H P ++ +PSPL+ RWR GG C
Sbjct: 593 EVAAVVIK------KKPVEGSYTSFEETSVIIPGGVHSFP--EKGAPSPLISRWRSGGLC 644
Query: 590 DCGGWDMACPIAVLGNAYDNNWANSVTKEGENPMELFVLSKNEQVVIFFEQGGKEE--LP 647
DCGGWD+ C + VL N VL K Q F+Q E+ P
Sbjct: 645 DCGGWDVGCKLHVLSNKT-------------------VLHKFNQSFTLFDQEVSEQDSSP 685
Query: 648 ALSIKGNEKGQLLVHFHARLSAMQAFSTCISLLHCS 683
AL++ + G V F + +S +QAF C+++L C+
Sbjct: 686 ALAMTELKTGIYRVEFGSFVSPLQAFFVCVTVLTCA 721
>AT1G04490.1 | chr1:1218020-1219325 REVERSE LENGTH=402
Length = 401
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 540 FNRSK-SKELKSGLSPGTVKVITPSGLHGLPNDDETSPSPLLDRWRYGGGCDCGGWDMAC 598
F RS + E ++ S ++ V+ PSG+HG P D PS L++RW+ G CDCGGWD+ C
Sbjct: 272 FQRSNDASETETSTSSISMNVVIPSGIHGGPED---GPSSLIERWKSQGNCDCGGWDLCC 328
Query: 599 PIAVLGNAYDNNWANSVTKEGENPMELFVLSKNEQVVIFFEQGGKEELPALSIKGNEKGQ 658
+ +L +G+ + +Q F +G K E L I G
Sbjct: 329 SLTLL--------------KGQ--------PRKDQYFELFIEGSKHETTGLKIVNVSGGL 366
Query: 659 LLVHFHARLSAMQAFSTCISLLH 681
LV F A+L+++Q+F+ ++ +H
Sbjct: 367 YLVQFEAKLTSLQSFAIALAFIH 389
>AT2G33360.1 | chr2:14140901-14142870 FORWARD LENGTH=604
Length = 603
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 45/187 (24%)
Query: 522 EEDLYPHLEIAATVI--------------------------QVPFNRSKSKELKSGLSPG 555
+ DL P+LE +A V+ ++P R+K K
Sbjct: 418 DNDLPPNLETSAVVVREQFPVEEEEEEEVEKVGGWGMKFLKKIPLARTKDAS-KCSKHST 476
Query: 556 TVKVITPSGLHGLPNDDETSPSPLLDRWRYGGGCDCGGWDMACPIAVL-GNAYDNNWANS 614
++ V+ P G+HG P + PS L+ RW+ GG CDC GWD+ CP+ VL G A +
Sbjct: 477 SIDVVIPLGIHGGPRNRNGGPSSLIQRWKSGGCCDCSGWDLGCPLTVLKGQARKD----- 531
Query: 615 VTKEGENPMELFVLSKNEQVVIFFEQGGKEELPALSIKGNEKGQLLVHFHARLSAMQAFS 674
+ E LF L F +G + P L I G V A++S +Q+FS
Sbjct: 532 ---QSEGQCNLFEL---------FTEGLMQGSPGLRIMNVRDGLYFVQSQAKISVLQSFS 579
Query: 675 TCISLLH 681
++ +H
Sbjct: 580 IALAYIH 586
>AT2G37930.1 | chr2:15873284-15874770 FORWARD LENGTH=468
Length = 467
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 21/124 (16%)
Query: 556 TVKVITPSGLHGLPNDDETSPSPLLDRWRYGGGCDCGGWDMACPIAVLGNAYDNNWANSV 615
T +I PSG+H LP D SP PL++RW+ GG CDCGGWD+ C + VL +Y++ ++
Sbjct: 322 TTTIILPSGVHTLPKDGNNSPLPLINRWKTGGECDCGGWDIGCKLRVL--SYNHTKTQTL 379
Query: 616 TKEGENPMELFVLSKNEQVVIFFEQGGKEELPALSIKGNEKGQLLVHFHARLSAMQAFST 675
+ +LF ++E G +EL + V F + +S ++AF
Sbjct: 380 SS-----FQLFDQERDEPAFKMVSHG--DELHS------------VEFGSSISLLEAFFI 420
Query: 676 CISL 679
+++
Sbjct: 421 SLAV 424
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.128 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,098,074
Number of extensions: 688090
Number of successful extensions: 1440
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1420
Number of HSP's successfully gapped: 8
Length of query: 749
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 643
Effective length of database: 8,200,473
Effective search space: 5272904139
Effective search space used: 5272904139
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)