Os03g0102400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0102400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.9 | 0.234 | 10.4 | 0.48 | 0.403 | -1.17 | -0.0206 | 1.89 | 0.298 | 3.53 | 23.45 | 1459 | -- | -- |
| 28.15 | 0.247 | 10.4 | 0.693 | 0.378 | -1.39 | 0.0742 | -- | 0.345 | 4.16 | 20.76 | 2657 | -- | -- |
| 24.9 | 0.232 | 10.4 | 0.483 | 0.402 | -1.17 | -- | 1.89 | 0.301 | 3.56 | 23.38 | 1440 | -- | -- |
| 27.15 | 0.243 | 10.4 | 0.555 | 0.389 | -1.63 | -- | -- | 0.366 | 3.49 | 20.05 | 2883 | -- | -- |
| 32.89 | 0.267 | 10.5 | 0.437 | -- | -1.09 | -- | 2.1 | 0.276 | -- | 25.08 | 1205 | -- | -- |
| 52.33 | 0.339 | 10.4 | 1.16 | 0.436 | -- | -0.154 | -- | 0.599 | 3.56 | -- | -- | -- | -- |
| 52.4 | 0.339 | 10.4 | 1.17 | 0.435 | -- | -- | -- | 0.6 | 3.59 | -- | -- | -- | -- |
| 34.66 | 0.274 | 10.4 | 0.566 | -- | -1.66 | -- | -- | 0.371 | -- | 20.03 | 2608 | -- | -- |
| 30.77 | 0.258 | 10.4 | -- | 0.409 | -1.85 | -- | -- | 0.231 | 3.73 | 21.12 | 8325 | -- | -- |
| 62.95 | 0.371 | 10.4 | 1.19 | -- | -- | -- | -- | 0.611 | -- | -- | -- | -- | -- |
| 88.29 | 0.44 | 10.4 | -- | 0.458 | -- | -- | -- | 0.47 | 3.57 | -- | -- | -- | -- |
| 39.92 | 0.294 | 10.4 | -- | -- | -1.88 | -- | -- | 0.235 | -- | 21.2 | 8304 | -- | -- |
| 100 | 0.467 | 10.4 | -- | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 20 |
| 3 | 25.08 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 20 |
| 71 | 25.30 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 72 | 25.31 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 77 | 25.33 | temperature | 25 | 1440 | < th | dose dependent | sin | 6 | NA |
| 93 | 25.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 100 | 25.37 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 110 | 25.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 205 | 25.70 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 213 | 25.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 250 | 25.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 276 | 25.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 295 | 26.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 335 | 26.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 363 | 26.14 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 412 | 26.20 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 536 | 26.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 675 | 26.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 704 | 26.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 822 | 26.57 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 833 | 26.57 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 987 | 26.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 988 | 26.67 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |