Os03g0101800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function Cys-rich family protein.
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Os03g0101800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function Cys-rich family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.81 | 0.269 | 11.5 | 1.2 | 0.444 | 0.598 | -0.0282 | -0.167 | 0.569 | 1.6 | 42.42 | 36 | -- | -- |
| 32.81 | 0.267 | 11.5 | 1.2 | 0.447 | 0.628 | -0.143 | -- | 0.567 | 1.49 | 45.82 | 45 | -- | -- |
| 32.81 | 0.267 | 11.5 | 1.21 | 0.44 | 0.6 | -- | -0.187 | 0.57 | 1.62 | 42.15 | 35 | -- | -- |
| 32.89 | 0.267 | 11.5 | 1.21 | 0.447 | 0.632 | -- | -- | 0.568 | 1.53 | 46.2 | 45 | -- | -- |
| 34.58 | 0.274 | 11.5 | 1.23 | -- | 0.804 | -- | -0.3 | 0.587 | -- | 18.98 | 135 | -- | -- |
| 38.54 | 0.291 | 11.6 | 1.19 | 0.861 | -- | -0.151 | -- | 0.538 | 0.961 | -- | -- | -- | -- |
| 38.64 | 0.291 | 11.6 | 1.19 | 0.861 | -- | -- | -- | 0.539 | 0.973 | -- | -- | -- | -- |
| 34.94 | 0.275 | 11.5 | 1.24 | -- | 0.811 | -- | -- | 0.587 | -- | 19.17 | 159 | -- | -- |
| 70.52 | 0.391 | 11.6 | -- | 0.496 | 0.701 | -- | -- | 0.428 | 1.5 | 80 | 53 | -- | -- |
| 84.82 | 0.43 | 11.5 | 1.23 | -- | -- | -- | -- | 0.555 | -- | -- | -- | -- | -- |
| 76.19 | 0.408 | 11.6 | -- | 0.881 | -- | -- | -- | 0.406 | 1.03 | -- | -- | -- | -- |
| 73.86 | 0.4 | 11.6 | -- | -- | 0.747 | -- | -- | 0.45 | -- | 10 | 177 | -- | -- |
| 124.46 | 0.521 | 11.6 | -- | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 3 | 29.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 4 | 29.55 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 5 | 29.58 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 11 | 29.77 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 15 | 29.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 16 | 29.88 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 17 | 29.88 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 36 | 30.17 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 38 | 30.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 14 |
| 42 | 30.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 17 |
| 53 | 30.31 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 67 | 30.41 | wind | 9.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 78 | 30.45 | wind | 9.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 92 | 30.48 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 115 | 30.53 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 20 |
| 133 | 30.57 | wind | 9.0 | 43200 | > th | dose dependent | sin | 14 | NA |
| 140 | 30.59 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 147 | 30.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 179 | 30.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 185 | 30.69 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 218 | 30.74 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 225 | 30.75 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 230 | 30.75 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 5 |
| 235 | 30.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 245 | 30.77 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 4 |
| 277 | 30.81 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 324 | 30.85 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 338 | 30.86 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 398 | 30.91 | wind | 5.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 447 | 30.95 | wind | 5.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 449 | 30.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 494 | 30.98 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 505 | 30.99 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 4 |
| 513 | 31.00 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 535 | 31.00 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 600 | 31.03 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 606 | 31.03 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 619 | 31.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 628 | 31.05 | wind | 9.0 | 43200 | < th | dose independent | rect. | 4 | 18 |
| 634 | 31.05 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 677 | 31.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 683 | 31.08 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 750 | 31.11 | wind | 9.0 | 43200 | < th | dose independent | no | NA | NA |
| 760 | 31.11 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 771 | 31.12 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 838 | 31.13 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 840 | 31.14 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 852 | 31.14 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 4 | 18 |
| 867 | 31.15 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 924 | 31.17 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 928 | 31.18 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 935 | 31.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 941 | 31.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 18 |
| 961 | 31.19 | radiation | 10.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 976 | 31.19 | wind | 7.0 | 43200 | > th | dose dependent | no | NA | NA |
| 980 | 31.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 8 | 14 |
| 995 | 31.19 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 23 |