BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0101800 Os03g0101800|AK061186
(240 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45010.1 | chr2:18568045-18569615 FORWARD LENGTH=245 312 9e-86
AT5G51400.1 | chr5:20878784-20880036 REVERSE LENGTH=242 276 5e-75
AT2G40935.1 | chr2:17083199-17084216 FORWARD LENGTH=191 83 1e-16
AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134 54 8e-08
AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185 52 3e-07
AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185 50 1e-06
AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191 50 1e-06
AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153 50 1e-06
AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153 48 4e-06
AT1G14880.1 | chr1:5132791-5133663 REVERSE LENGTH=152 48 4e-06
AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162 47 8e-06
>AT2G45010.1 | chr2:18568045-18569615 FORWARD LENGTH=245
Length = 244
Score = 312 bits (800), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 174/214 (81%), Gaps = 3/214 (1%)
Query: 11 SRYVKLSREHDAPAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEPWTTG 70
SRYVKL +E AP EDI PGELNQP+ VPQL R+C EC QVLPE+YEPP+DE WTTG
Sbjct: 8 SRYVKLRKEQ-APV-EEDITPGELNQPIDVPQLNVRKCHECMQVLPETYEPPSDENWTTG 65
Query: 71 IFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGGIALAILTAIFH 130
IF C +DP++CRTGLFCPCVLFGRNIEA+RE+IPWT PCVCHAV VEGG+ALA +TA+F
Sbjct: 66 IFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAVTALFS 125
Query: 131 G-VDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCANCQ 189
G +DP+T+ +I EGL F+WW+CG Y+G+FRQELQ+KYHLKN+PCD CMVHCCLHWCA CQ
Sbjct: 126 GYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHWCALCQ 185
Query: 190 EHRERTGRLAENSAVPMTVVNPPAVQEMSMAESR 223
EHRE L++ A T ++PP VQEM+ E R
Sbjct: 186 EHREMKNHLSDTEASSSTTMDPPPVQEMNTEERR 219
>AT5G51400.1 | chr5:20878784-20880036 REVERSE LENGTH=242
Length = 241
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 130/215 (60%), Positives = 158/215 (73%), Gaps = 4/215 (1%)
Query: 10 PSRYVKLSREHDAPAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEPWTT 69
PSRYVKL++E AP ++I PGELNQP+ V L +C+ECGQ LPE++E PADEPWTT
Sbjct: 8 PSRYVKLTKEQ---APVDEIHPGELNQPIEVSHLAVHKCNECGQPLPENFEAPADEPWTT 64
Query: 70 GIFACTDDPQTCRTGLFCPCVLFGRNIEALR-EDIPWTTPCVCHAVFVEGGIALAILTAI 128
GIF CT+D + GLFCP VLFGR E L E+ W C+CH++ VEGG+ A + A
Sbjct: 65 GIFGCTEDMNSFWLGLFCPSVLFGRVYETLSDEETSWKKACICHSIVVEGGLTAASMLAC 124
Query: 129 FHGVDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCANC 188
G+DP TS LI EGL+F WW+CG YTG RQ LQRKYHL+N+PCDPCMVHCCLH+CA C
Sbjct: 125 VPGIDPHTSLLIWEGLLFVWWMCGIYTGNVRQTLQRKYHLQNAPCDPCMVHCCLHFCAVC 184
Query: 189 QEHRERTGRLAENSAVPMTVVNPPAVQEMSMAESR 223
QEHRE RL++N +PMTV+NPP VQEMS + R
Sbjct: 185 QEHREMKNRLSDNFVMPMTVINPPPVQEMSASGDR 219
>AT2G40935.1 | chr2:17083199-17084216 FORWARD LENGTH=191
Length = 190
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 82/168 (48%), Gaps = 21/168 (12%)
Query: 60 EPPADEP--WTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVE 117
E D+P W++GI AC DD Q+C GLFCPC +FG+N E L + PC+ H
Sbjct: 38 ESTKDDPRQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGT-FAGPCLTHC---- 92
Query: 118 GGIALAILTAIFHGVDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCM 177
I+ A++ I + L G S + CG +R+ L+ KY+L+ +PC +
Sbjct: 93 --ISWALVNTIC-CFATNGALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFV 144
Query: 178 VHCCLHWCANCQEHRERTGRLAENSAVP----MTVVNPPAVQEMSMAE 221
H H CA CQE+RE R + + P M + N P Q M A
Sbjct: 145 THFFCHLCAICQEYREI--REQSSGSYPLDMKMAITNAPLAQTMESAN 190
>AT3G18470.1 | chr3:6335000-6335698 REVERSE LENGTH=134
Length = 133
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Query: 64 DEPWTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGGIALA 123
++ WT+G+F+C +D +T FCPCV FGR + E C
Sbjct: 2 EKQWTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRC-------------- 47
Query: 124 ILTAIFHGVDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLH 183
+F+G+ ++G +FS +R +++ K+ L SP C+ H
Sbjct: 48 ---GVFYGL---ICCVVGLPCLFSC--------TYRTKIRSKFGLPESPTSDCVTHFFCE 93
Query: 184 WCANCQEHRERTGRLAEN----SAVPMTVVNPPAVQEM 217
CA CQEHRE R + S + PP Q+M
Sbjct: 94 CCALCQEHRELKTRGLDPSIGWSGNMQRTMAPPMSQQM 131
>AT3G18460.1 | chr3:6333048-6333948 REVERSE LENGTH=185
Length = 184
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 36/158 (22%)
Query: 67 WTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGGIALAILT 126
W++ +F C +D + PCV G+ E + E TPC GG+ ++
Sbjct: 54 WSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEG---ATPCA------TGGLLYGMI- 103
Query: 127 AIFHGVDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCA 186
F IG V Y+ +FR +++ KY L ++P + H CA
Sbjct: 104 -----------FFIGVPFV--------YSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCA 144
Query: 187 NCQEHRERTGR-------LAENSAVPMTVVNPPAVQEM 217
CQE+RE R A N V++PP Q M
Sbjct: 145 LCQEYRELKHRGFDPNIGWAGNVQAQQPVMSPPTGQRM 182
>AT3G18450.1 | chr3:6331229-6332118 REVERSE LENGTH=185
Length = 184
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 41/177 (23%)
Query: 17 SREHDAPAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEPWTTGIFACTD 76
S +H A + G + +P ++P +P +Y+ ++ W++ +F C +
Sbjct: 14 SVQHTASPSNKVSHNGGIGKPANIPT-----------GIPVNYQQTQNQ-WSSQLFDCMN 61
Query: 77 DPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGGIALAILTAIFHGVDPRT 136
D + L PCV FG+ E + E TPC G+ L
Sbjct: 62 DSENAVITLIAPCVTFGQIAEIVDEG---ATPCAT------AGLLYGAL----------- 101
Query: 137 SFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCANCQEHRE 193
F G V+S+ +FR +++K+ L ++P + H A CQE+RE
Sbjct: 102 -FFTGASFVYSY--------MFRARIRKKFGLPDAPAPDWITHLVCMPFALCQEYRE 149
>AT1G52200.1 | chr1:19442271-19443407 REVERSE LENGTH=191
Length = 190
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 42/173 (24%)
Query: 30 RPGELNQPVHVPQLEGRRCSECGQVLPESYEP-----PADEPWTTGIFACTDDPQTCRTG 84
+PG NQ VP Q P +Y+ PW+TG+F C D
Sbjct: 20 QPGTPNQRTRVP---------VSQFAPPNYQQANVNLSVGRPWSTGLFDCQADQANAVLT 70
Query: 85 LFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGGIALAILTAIFHGVDPRTSFLIGEGL 144
PCV FG+ E V EG + + T ++ L+
Sbjct: 71 TIVPCVTFGQIAE----------------VMDEGEMTCPLGTFMY---------LLMMPA 105
Query: 145 VFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCANCQEHRERTGR 197
+ S W+ G+ +R++++RK++L +P C H C+ CQE+RE R
Sbjct: 106 LCSHWVMGSK---YREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELKIR 155
>AT5G35525.1 | chr5:13707084-13707818 FORWARD LENGTH=153
Length = 152
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 30/139 (21%)
Query: 60 EPPADEPWTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGG 119
P A+ W+TG C D Q C CPC+ FG+ + + T C
Sbjct: 9 NPHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRG---NTSCGTAG------ 59
Query: 120 IALAILTAIFHGVDPRTSFLIGEGLVFSWWLCG-TYTGIFRQELQRKYHLKNSPCDPCMV 178
AL +L A G CG Y+ I+R +++ +Y+++ C C+
Sbjct: 60 -ALYVLLAAITG-------------------CGCLYSCIYRGKIRAQYNIRGDGCTDCLK 99
Query: 179 HCCLHWCANCQEHRERTGR 197
H C CA QE+RE R
Sbjct: 100 HFCCELCALTQEYRELKHR 118
>AT1G14870.1 | chr1:5128591-5129458 REVERSE LENGTH=153
Length = 152
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 28/138 (20%)
Query: 60 EPPADEPWTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGG 119
+P A+ W+TG C D + C +CPC+ FG+ E + +T C G
Sbjct: 9 KPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRG---STSC---------G 56
Query: 120 IALAILTAIFHGVDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVH 179
A A+ I + + G + Y+ +R +++ +Y++K C C+ H
Sbjct: 57 TAGALYALI--------AVVTGCACI--------YSCFYRGKMRAQYNIKGDDCTDCLKH 100
Query: 180 CCLHWCANCQEHRERTGR 197
C C+ Q++RE R
Sbjct: 101 FCCELCSLTQQYRELKHR 118
>AT1G14880.1 | chr1:5132791-5133663 REVERSE LENGTH=152
Length = 151
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 30/139 (21%)
Query: 60 EPPADEPWTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGG 119
+P A W+TG C D + C L CPC+ FG+ E + G
Sbjct: 8 KPHAQGEWSTGFCDCFSDCRNCCITLCCPCITFGQVAE----------------IVDRGS 51
Query: 120 IALAILTAIFHGVDPRTSFLIGEGLVFSWWLCG-TYTGIFRQELQRKYHLKNSPCDPCMV 178
+ A++ +D TS CG Y + +++ +Y++K C C+
Sbjct: 52 KSCCAAGALYMLIDLITS-------------CGRMYACFYSGKMRAQYNIKGDGCTDCLK 98
Query: 179 HCCLHWCANCQEHRERTGR 197
H C + CA Q++RE R
Sbjct: 99 HFCCNLCALTQQYRELKHR 117
>AT1G68630.1 | chr1:25768653-25769458 FORWARD LENGTH=162
Length = 161
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 53/136 (38%), Gaps = 29/136 (21%)
Query: 67 WTTGIFACTDDPQTCRTGLFCPCVLFGRNIEALREDIPWTTPCVCHAVFVEGGIALAILT 126
WTTG+ C +D C PCV F +N+E + T PC+ G I LA+
Sbjct: 29 WTTGLCDCHEDAHICVQTAIMPCVSFAQNVEIVNRG---TIPCM-----NAGLIHLAL-- 78
Query: 127 AIFHGVDPRTSFLIGEGLVFSWWLCGTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCA 186
G + WL Y R L+ + L PC +VH CA
Sbjct: 79 ----------------GFIGCSWL---YAFPNRSRLREHFALPEEPCRDFLVHLFCTPCA 119
Query: 187 NCQEHRERTGRLAENS 202
CQE RE R A+ S
Sbjct: 120 ICQESRELKNRGADPS 135
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.137 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,837,021
Number of extensions: 256360
Number of successful extensions: 519
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 510
Number of HSP's successfully gapped: 12
Length of query: 240
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 144
Effective length of database: 8,474,633
Effective search space: 1220347152
Effective search space used: 1220347152
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)