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Os02g0833600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Basic leucine zipper transcription factor (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0189) R2 : 0.61
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.24 (0.0464) R2dC : 0.613 R2C : 0.61
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 9.22e-05 (0.0396) R2dN8 : 5.96e-09 R2N8 : -0.00372
σ : 0.355
deviance : 57.7
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_____
C
peak time of C : 21.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.67 0.273 11.5 0.0721 1.25 -0.295 -1.04 -2.24 -0.0492 21.6 26.8 5587 -- --
34.84 0.275 11.4 0.719 1.19 -0.515 -0.99 -- 0.247 21.6 29.26 11808 -- --
37.52 0.285 11.5 0.00991 1.26 -0.269 -- -2.73 -0.0688 21.6 26.53 5413 -- --
38.58 0.289 11.4 0.728 1.23 -0.512 -- -- 0.249 21.4 30.18 11788 -- --
120.84 0.512 11.3 1.16 -- -0.712 -- 1.57 0.105 -- 34.3 7253 -- --
46.29 0.319 11.4 0.476 1.23 -- -1.09 -- 0.0557 21.5 -- -- -- --
50.66 0.333 11.4 0.517 1.24 -- -- -- 0.0577 21.4 -- -- -- --
126.46 0.524 11.3 0.963 -- -0.434 -- -- 0.109 -- 33.8 7306 -- --
49.94 0.329 11.4 -- 1.24 -0.368 -- -- 0.0205 21.6 29.93 7038 -- --
140.59 0.554 11.4 0.524 -- -- -- -- 0.0536 -- -- -- -- --
57.7 0.355 11.4 -- 1.24 -- -- -- 9.22e-05 21.5 -- -- -- --
134.5 0.54 11.4 -- -- -0.423 -- -- 0.0626 -- 33.99 7283 -- --
147.84 0.568 11.4 -- -- -- -- -- -0.00456 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.12 precipitation 0.1 43200 > th dose dependent rect. 13 8
2 32.13 precipitation 0.1 43200 > th dose dependent rect. 15 6
6 32.50 precipitation 0.1 43200 < th dose independent rect. 17 4
7 32.50 precipitation 0.1 43200 < th dose dependent rect. 17 4
9 32.51 precipitation 0.1 43200 > th dose independent rect. 17 4
10 32.51 precipitation 0.1 43200 > th dose dependent rect. 13 5
16 32.68 precipitation 0.1 43200 < th dose independent rect. 16 2
17 32.68 precipitation 0.1 43200 < th dose dependent rect. 16 2
18 32.70 precipitation 0.1 43200 > th dose independent rect. 16 2
19 32.70 precipitation 0.1 43200 > th dose independent rect. 19 2
22 32.74 humidity 60.0 14400 > th dose independent rect. 13 1
25 32.76 precipitation 0.1 43200 < th dose independent rect. 19 2
26 32.76 precipitation 0.1 43200 < th dose dependent rect. 19 2
39 32.93 precipitation 0.1 43200 > th dose dependent rect. 18 3
41 32.96 wind 3.0 43200 > th dose dependent rect. 6 2
52 33.03 humidity 70.0 14400 > th dose independent rect. 18 1
54 33.06 wind 1.0 43200 < th dose dependent rect. 24 7
56 33.14 wind 9.0 43200 < th dose dependent rect. 3 5
57 33.14 wind 9.0 43200 < th dose dependent rect. 1 9
63 33.17 humidity 60.0 14400 < th dose independent rect. 13 1
65 33.17 wind 3.0 43200 > th dose dependent rect. 19 13
67 33.18 humidity 70.0 14400 < th dose independent rect. 17 3
78 33.20 wind 3.0 43200 > th dose dependent rect. 18 15
83 33.22 wind 1.0 43200 > th dose dependent rect. 3 5
91 33.24 wind 9.0 43200 < th dose dependent rect. 4 3
98 33.25 wind 1.0 43200 > th dose dependent rect. 1 9
106 33.28 humidity 70.0 14400 < th dose dependent rect. 17 2
123 33.30 wind 5.0 43200 < th dose independent rect. 6 1
127 33.31 wind 3.0 43200 > th dose dependent sin 10 NA
130 33.32 humidity 70.0 14400 > th dose independent rect. 17 3
152 33.37 wind 5.0 43200 > th dose independent rect. 6 1
165 33.40 wind 1.0 43200 < th dose dependent rect. 1 11
205 33.46 wind 9.0 43200 < th dose dependent rect. 21 12
227 33.52 wind 7.0 43200 > th dose independent rect. 12 1
285 33.60 wind 9.0 43200 < th dose dependent sin 7 NA
297 33.62 precipitation 0.1 43200 > th dose dependent rect. 20 1
317 33.65 wind 3.0 43200 > th dose dependent sin 5 NA
341 33.69 wind 7.0 43200 > th dose dependent rect. 12 1
379 33.74 temperature 30.0 14400 > th dose independent rect. 15 1
380 33.74 temperature 30.0 14400 < th dose independent rect. 14 1
404 33.78 precipitation 0.1 43200 > th dose dependent sin 18 NA
406 33.78 precipitation 0.1 43200 > th dose dependent rect. 16 13
415 33.80 temperature 30.0 14400 > th dose dependent rect. 17 16
424 33.82 wind 1.0 43200 < th dose dependent rect. 3 9
432 33.83 wind 3.0 43200 > th dose independent rect. 3 5
467 33.86 wind 3.0 43200 > th dose independent rect. 4 2
475 33.86 temperature 30.0 1440 > th dose independent rect. 18 21
483 33.87 temperature 30.0 1440 < th dose independent rect. 18 21
485 33.87 temperature 30.0 1440 > th dose independent rect. 10 23
490 33.88 temperature 30.0 1440 < th dose independent rect. 10 23
491 33.88 temperature 30.0 14400 > th dose dependent rect. 17 2
515 33.89 wind 7.0 43200 < th dose independent rect. 12 1
522 33.90 wind 3.0 43200 < th dose independent rect. 4 2
524 33.90 temperature 30.0 14400 < th dose independent rect. 14 6
527 33.90 temperature 30.0 14400 < th dose independent rect. 14 15
528 33.90 temperature 30.0 14400 < th dose independent rect. 14 19
531 33.90 temperature 10.0 14400 > th dose dependent rect. 17 2
546 33.91 temperature 30.0 1440 < th dose independent rect. 8 11
558 33.91 temperature 30.0 1440 < th dose independent rect. 4 15
582 33.91 temperature 30.0 1440 < th dose independent rect. 8 21
590 33.91 temperature 30.0 1440 < th dose independent rect. 13 23
599 33.92 temperature 30.0 1440 < th dose independent sin 23 NA
602 33.92 temperature 30.0 1440 < th dose independent no NA NA
607 33.92 temperature 30.0 1440 < th dose independent rect. 8 7
613 33.92 temperature 30.0 1440 < th dose independent rect. 4 11
664 33.92 temperature 30.0 1440 > th dose independent rect. 13 23
681 33.93 temperature 30.0 1440 > th dose independent sin 22 NA
686 33.93 wind 3.0 43200 < th dose independent rect. 3 4
688 33.93 temperature 30.0 1440 > th dose independent rect. 8 7
692 33.93 temperature 30.0 1440 < th dose independent rect. 10 9
713 33.93 temperature 30.0 1440 < th dose independent rect. 10 19
726 33.94 temperature 30.0 1440 > th dose independent no NA NA
728 33.94 humidity 70.0 14400 < th dose independent sin 12 NA
731 33.94 temperature 30.0 1440 > th dose independent rect. 10 9
734 33.94 temperature 30.0 1440 > th dose independent rect. 8 11
859 33.95 temperature 30.0 1440 > th dose independent rect. 10 5
882 33.95 temperature 30.0 14400 > th dose independent rect. 14 19
900 33.96 temperature 30.0 14400 > th dose independent rect. 14 5
919 33.96 temperature 30.0 14400 < th dose independent rect. 18 11
972 33.97 temperature 30.0 14400 < th dose independent rect. 18 2