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Os02g0832600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.012) R2 : 0.583
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.765 (0.0313) R2dC : 0.549 R2C : 0.527
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.174 (0.0252) R2dN8 : 0.0562 R2N8 : 0.0338
σ : 0.226
deviance : 23.29
__
_____
C
peak time of C : 5.36
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.38 0.207 11.3 -0.17 0.762 -0.342 -0.179 -1.26 -0.146 5.35 0.6117 4899 -- --
20.01 0.208 11.4 -0.163 0.758 -0.467 -0.19 -- -0.147 5.38 1.497 2379 -- --
19.45 0.205 11.3 -0.161 0.763 -0.309 -- -1.17 -0.147 5.38 0.7517 4918 -- --
20.09 0.209 11.4 -0.164 0.758 -0.462 -- -- -0.148 5.39 1.5 2377 -- --
49.46 0.328 11.4 -0.14 -- -0.247 -- -1.26 -0.134 -- 0.9503 5283 -- --
23.24 0.226 11.4 -0.0317 0.766 -- -0.111 -- -0.178 5.34 -- -- -- --
23.27 0.226 11.4 -0.0318 0.766 -- -- -- -0.177 5.36 -- -- -- --
50.06 0.33 11.4 -0.155 -- -0.507 -- -- -0.127 -- 1.5 2457 -- --
20.73 0.212 11.4 -- 0.756 -0.388 -- -- -0.149 5.4 1.5 2382 -- --
53.82 0.343 11.4 -0.00575 -- -- -- -- -0.158 -- -- -- -- --
23.29 0.226 11.4 -- 0.765 -- -- -- -0.174 5.36 -- -- -- --
50.59 0.331 11.4 -- -- -0.433 -- -- -0.115 -- 1.5 2456 -- --
53.82 0.342 11.4 -- -- -- -- -- -0.158 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.70 wind 1.0 43200 < th dose independent rect. 1 1
2 17.76 wind 9.0 14400 < th dose independent rect. 10 1
3 17.80 wind 1.0 43200 > th dose independent rect. 1 1
4 17.84 wind 1.0 43200 < th dose dependent rect. 1 1
5 17.85 humidity 80.0 43200 > th dose independent rect. 4 1
8 17.90 humidity 80.0 43200 < th dose independent rect. 4 1
12 17.92 wind 3.0 43200 > th dose independent rect. 6 1
14 17.92 humidity 80.0 43200 < th dose independent rect. 3 4
18 17.95 wind 3.0 43200 < th dose independent rect. 6 1
19 17.95 humidity 80.0 43200 < th dose dependent rect. 5 1
31 18.02 humidity 80.0 43200 < th dose dependent rect. 24 7
33 18.03 humidity 80.0 43200 < th dose dependent rect. 2 5
63 18.13 humidity 80.0 43200 < th dose dependent rect. 24 1
94 18.22 wind 1.0 43200 > th dose dependent rect. 6 1
119 18.30 precipitation 0.1 14400 > th dose independent rect. 13 7
120 18.30 precipitation 0.1 14400 < th dose independent rect. 13 7
121 18.30 wind 5.0 43200 < th dose dependent rect. 6 1
123 18.30 precipitation 0.1 14400 < th dose dependent rect. 13 7
127 18.32 wind 9.0 14400 > th dose independent rect. 7 4
132 18.33 precipitation 0.1 14400 < th dose independent rect. 17 3
133 18.33 precipitation 0.1 14400 > th dose independent rect. 16 4
139 18.33 precipitation 0.1 14400 < th dose dependent rect. 17 3
166 18.39 wind 9.0 14400 > th dose independent rect. 9 2
230 18.50 precipitation 0.1 14400 > th dose independent sin 20 NA
232 18.50 precipitation 0.1 14400 > th dose independent rect. 16 1
233 18.50 humidity 80.0 14400 > th dose independent rect. 13 2
239 18.50 precipitation 0.1 14400 > th dose dependent rect. 13 4
241 18.50 wind 1.0 43200 < th dose dependent rect. 19 9
245 18.51 precipitation 0.1 14400 < th dose independent sin 19 NA
247 18.51 precipitation 0.1 14400 < th dose independent rect. 16 1
249 18.51 precipitation 0.1 14400 < th dose dependent sin 19 NA
251 18.51 precipitation 0.1 14400 < th dose dependent rect. 16 1
253 18.51 wind 1.0 43200 < th dose dependent rect. 21 7
254 18.51 precipitation 0.1 14400 > th dose dependent rect. 13 7
285 18.55 precipitation 0.1 14400 > th dose dependent rect. 17 3
297 18.56 precipitation 0.1 14400 > th dose dependent rect. 15 2
306 18.58 humidity 80.0 14400 < th dose independent rect. 13 2
311 18.58 precipitation 0.1 14400 < th dose independent rect. 13 13
314 18.58 precipitation 0.1 14400 < th dose dependent rect. 13 13
315 18.58 precipitation 0.1 14400 > th dose dependent rect. 4 16
321 18.59 precipitation 0.1 14400 > th dose independent rect. 13 12
374 18.62 wind 3.0 43200 < th dose independent rect. 6 4
382 18.62 wind 3.0 43200 < th dose dependent rect. 6 4
409 18.64 precipitation 0.1 14400 < th dose independent rect. 15 11
422 18.64 precipitation 0.1 14400 < th dose dependent rect. 15 11
432 18.65 precipitation 0.1 14400 > th dose independent rect. 15 10
435 18.65 wind 3.0 43200 < th dose independent rect. 2 12
443 18.65 wind 1.0 43200 < th dose dependent rect. 23 5
454 18.66 humidity 90.0 14400 > th dose independent rect. 19 5
455 18.66 humidity 90.0 14400 > th dose independent rect. 17 7
489 18.67 wind 3.0 43200 < th dose dependent rect. 24 11
502 18.68 precipitation 0.1 14400 > th dose dependent sin 1 NA
511 18.69 temperature 20.0 14400 < th dose independent rect. 20 1
516 18.69 wind 3.0 43200 < th dose independent rect. 1 9
517 18.69 wind 3.0 43200 < th dose independent rect. 5 9
532 18.70 humidity 80.0 14400 < th dose independent rect. 13 4
536 18.70 humidity 80.0 14400 > th dose independent rect. 13 5
551 18.70 humidity 90.0 14400 > th dose dependent rect. 4 18
555 18.71 radiation 30.0 43200 < th dose independent rect. 11 1
561 18.71 wind 3.0 43200 > th dose independent rect. 5 9
565 18.71 wind 3.0 43200 > th dose independent rect. 2 12
603 18.73 wind 3.0 43200 < th dose independent sin 5 NA
607 18.73 wind 3.0 43200 < th dose independent rect. 2 5
616 18.73 humidity 90.0 14400 > th dose independent rect. 13 11
630 18.74 wind 3.0 14400 < th dose independent rect. 3 1
657 18.75 precipitation 0.1 4320 > th dose independent sin 2 NA
689 18.76 precipitation 0.1 4320 > th dose independent rect. 4 13
690 18.76 precipitation 0.1 4320 > th dose independent rect. 2 15
695 18.76 humidity 90.0 14400 > th dose dependent rect. 20 1
700 18.76 precipitation 0.1 14400 > th dose dependent rect. 13 14
721 18.77 precipitation 0.1 4320 < th dose independent rect. 2 15
729 18.77 precipitation 0.1 4320 < th dose dependent rect. 2 15
739 18.78 wind 3.0 43200 > th dose independent rect. 1 9
759 18.79 wind 3.0 43200 > th dose independent sin 4 NA
761 18.79 precipitation 0.1 4320 < th dose independent sin 2 NA
781 18.79 precipitation 0.1 4320 < th dose dependent sin 2 NA
788 18.80 humidity 90.0 14400 > th dose independent sin 17 NA
818 18.80 radiation 40.0 43200 > th dose dependent rect. 11 1
822 18.80 wind 3.0 43200 < th dose dependent rect. 3 10
860 18.81 wind 3.0 43200 < th dose dependent rect. 21 13
870 18.82 wind 3.0 14400 > th dose independent rect. 3 1
872 18.82 wind 3.0 43200 > th dose independent rect. 2 5
918 18.83 humidity 80.0 14400 > th dose dependent rect. 13 6
929 18.84 radiation 30.0 43200 > th dose independent rect. 11 1
956 18.84 precipitation 0.1 4320 > th dose dependent rect. 4 13
997 18.85 humidity 90.0 14400 > th dose dependent sin 17 NA