Os02g0827300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF382 domain containing protein.
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Os02g0827300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF382 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.72 | 0.219 | 12.9 | 0.919 | 0.546 | -0.298 | 0.424 | -0.487 | 0.209 | 3.03 | 24.6 | 275 | -- | -- |
| 22.39 | 0.22 | 12.9 | 0.76 | 0.543 | -0.321 | 0.246 | -- | 0.161 | 3 | 24.5 | 263 | -- | -- |
| 22.23 | 0.22 | 12.9 | 0.863 | 0.551 | -0.306 | -- | -0.327 | 0.187 | 3.06 | 24.5 | 274 | -- | -- |
| 22.57 | 0.221 | 12.9 | 0.756 | 0.554 | -0.319 | -- | -- | 0.154 | 3.06 | 24.53 | 264 | -- | -- |
| 26.8 | 0.241 | 12.9 | 0.873 | -- | -0.498 | -- | -0.58 | 0.185 | -- | 24.7 | 1068 | -- | -- |
| 27.94 | 0.248 | 12.9 | 0.866 | 0.402 | -- | 0.186 | -- | 0.319 | 2.22 | -- | -- | -- | -- |
| 28.06 | 0.248 | 12.9 | 0.86 | 0.402 | -- | -- | -- | 0.318 | 2.26 | -- | -- | -- | -- |
| 27.32 | 0.243 | 12.9 | 0.695 | -- | -0.532 | -- | -- | 0.129 | -- | 24.8 | 1064 | -- | -- |
| 36.79 | 0.283 | 12.9 | -- | 0.602 | -0.436 | -- | -- | 0.0184 | 3.12 | 24.4 | 254 | -- | -- |
| 37.7 | 0.287 | 12.8 | 0.877 | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
| 47.56 | 0.323 | 12.9 | -- | 0.419 | -- | -- | -- | 0.222 | 2.3 | -- | -- | -- | -- |
| 39.72 | 0.294 | 12.9 | -- | -- | -0.639 | -- | -- | 0.0565 | -- | 24.7 | 1127 | -- | -- |
| 57.99 | 0.355 | 12.9 | -- | -- | -- | -- | -- | 0.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 2 | 21.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 3 | 21.68 | temperature | 25 | 1440 | < th | dose independent | rect. | 23 | 13 |
| 4 | 21.70 | temperature | 25 | 270 | < th | dose independent | rect. | 20 | 18 |
| 11 | 21.81 | temperature | 25 | 270 | < th | dose independent | rect. | 20 | 15 |
| 13 | 21.82 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 16 | 21.84 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 25 | 21.88 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 34 | 21.96 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 35 | 21.97 | temperature | 25 | 270 | < th | dose independent | sin | 9 | NA |
| 46 | 22.01 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 54 | 22.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 61 | 22.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 23 | 13 |
| 97 | 22.16 | temperature | 25 | 1440 | < th | dose independent | sin | 7 | NA |
| 113 | 22.20 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 8 |
| 120 | 22.23 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 127 | 22.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 22 |
| 161 | 22.26 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 175 | 22.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 187 | 22.29 | temperature | 25 | 1440 | < th | dose dependent | sin | 4 | NA |
| 192 | 22.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 218 | 22.32 | wind | 1 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 220 | 22.32 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 23 |
| 221 | 22.32 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 239 | 22.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 262 | 22.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 277 | 22.36 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 348 | 22.40 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 363 | 22.40 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 17 |
| 368 | 22.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 387 | 22.41 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 434 | 22.43 | temperature | 25 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 442 | 22.43 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 444 | 22.43 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 458 | 22.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 460 | 22.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 461 | 22.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 468 | 22.44 | wind | 1 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 476 | 22.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 521 | 22.45 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 523 | 22.45 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 555 | 22.46 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 606 | 22.48 | temperature | 20 | 14400 | < th | dose dependent | sin | 3 | NA |
| 688 | 22.50 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 720 | 22.52 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 784 | 22.53 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 13 |
| 822 | 22.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 14 |
| 842 | 22.55 | temperature | 25 | 1440 | > th | dose independent | sin | 7 | NA |
| 844 | 22.55 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 14 |
| 864 | 22.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 882 | 22.56 | wind | 1 | 14400 | < th | dose dependent | sin | 9 | NA |
| 890 | 22.56 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 932 | 22.58 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 956 | 22.58 | temperature | 20 | 14400 | < th | dose dependent | rect. | 12 | 19 |