BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0827300 Os02g0827300|AK069159
         (582 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21660.2  | chr4:11506259-11509772 REVERSE LENGTH=599          605   e-173
AT1G11520.1  | chr1:3873029-3873619 FORWARD LENGTH=197            111   1e-24

>AT4G21660.2 | chr4:11506259-11509772 REVERSE LENGTH=599
          Length = 598

 Score =  605 bits (1561), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 308/494 (62%), Positives = 353/494 (71%), Gaps = 22/494 (4%)

Query: 86  ADLDDGLLADFKSIFDKFTFXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGTQQK 144
           A+ +DG   +FK IF+KF F                                  +   Q 
Sbjct: 88  AEFEDGFNDEFKEIFEKFNFREPLASEEDGTKDESEEKEDVKKKVNSDSDSDDDEQDNQN 147

Query: 145 KEGGLSNKQKKLQRRMKIAELKQICNRPDVVEVWDATASDPSLLVYLKSYRNTVPVPRHW 204
           KE G+SNK+KKLQRRMKIAELKQ+  RPDVVEVWDAT++DP LLV+LKSYRNTVPVPRHW
Sbjct: 148 KEKGISNKKKKLQRRMKIAELKQVSARPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHW 207

Query: 205 CQKRKFLQG--------------KRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLK 250
            QKRK+LQG              KRGIEKQPF LPDFIAATGIEKIRQAYIEKED KKLK
Sbjct: 208 SQKRKYLQGNYIKRDRNVCDNHGKRGIEKQPFHLPDFIAATGIEKIRQAYIEKEDGKKLK 267

Query: 251 QKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGDLYYEGKEFEVKLREMKPGMLS 310
           QKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKL++ GDLY+EGKEFEVKLRE KPG LS
Sbjct: 268 QKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSALGDLYFEGKEFEVKLRETKPGFLS 327

Query: 311 RELKEALGMPDGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGKPPV 370
            +LKEALGMP+GAPPPWLINMQRYGPPPSYP LKIPGLNAPIP GASFG+  G WGKPPV
Sbjct: 328 NDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPIGASFGFHAGGWGKPPV 387

Query: 371 DEHGRPLYGDVFGVLQQDEPNYDEEPVDRSKHWGDLXXXXXXXXXXXXXXXXXXXXXXXX 430
           DE+GRPLYGDVFGV QQD+PNY+EEP+D+SKHWGDL                        
Sbjct: 388 DEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHWGDL-EEEEEEEEEEEEEQEEEMDEEEL 446

Query: 431 XXGMQSVDTISSTPTGVETPDVIDLRKLQRKEPEKQTEKQLYQILEQKEERIAPGAIYGS 490
             G +SVDT+SSTPTG+ETPD I+LRK QRKEP    ++ LYQ+LE+K E +APG + G+
Sbjct: 447 EDGTESVDTLSSTPTGIETPDAIELRKDQRKEP----DRALYQVLEEKGESVAPGTLLGT 502

Query: 491 SHTYAI--GAQDKAGPKRVDLLKNQKSDKVDVTIQPEELEVMDDVXXXXXXXXXXXXXXX 548
           SHTY I  G Q+K G KRVDLL+ QK+D+VDV++QPEEL+ M++V               
Sbjct: 503 SHTYVIKTGTQEKTGAKRVDLLRGQKTDRVDVSLQPEELDAMENVLPAKYEEAREEEKLR 562

Query: 549 NQKEDFSDMVAENA 562
           N+  D SDMV E+ 
Sbjct: 563 NKPVDLSDMVVEHV 576



>AT1G11520.1 | chr1:3873029-3873619 FORWARD LENGTH=197
          Length = 196

 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/104 (54%), Positives = 76/104 (73%), Gaps = 7/104 (6%)

Query: 433 GMQSVDTISSTPTGVETPDVIDLRKLQRKEPEKQTEKQLYQILEQK-EERIAPGAIYGSS 491
            M    ++SSTPTG+ETPD I+LRK QRKEP++     LYQ+LE+K E  +APG +  ++
Sbjct: 86  AMDVSKSLSSTPTGIETPDAIELRKEQRKEPDRA----LYQVLEEKGESVVAPGTLLRTT 141

Query: 492 HTYAI--GAQDKAGPKRVDLLKNQKSDKVDVTIQPEELEVMDDV 533
           HTY I  G QDK G KRVDLL+ QK+D+VD ++QPEEL+ M +V
Sbjct: 142 HTYVIKTGTQDKTGTKRVDLLRGQKTDRVDFSLQPEELDAMGNV 185



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.314    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,020,956
Number of extensions: 429416
Number of successful extensions: 1247
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1240
Number of HSP's successfully gapped: 2
Length of query: 582
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 478
Effective length of database: 8,255,305
Effective search space: 3946035790
Effective search space used: 3946035790
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)