Os02g0825600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plasma membrane H+ ATPase (EC 3.6.3.6).
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Os02g0825600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plasma membrane H+ ATPase (EC 3.6.3.6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.87 | 0.384 | 9.22 | -0.713 | 0.363 | -1.6 | 0.291 | 1.22 | 0.368 | 20.8 | 25.08 | 258 | -- | -- |
| 67.51 | 0.383 | 9.22 | -0.84 | 0.362 | -1.54 | 0.26 | -- | 0.364 | 20.6 | 25 | 255 | -- | -- |
| 67.1 | 0.382 | 9.21 | -0.696 | 0.363 | -1.62 | -- | 1.36 | 0.377 | 20.5 | 25.02 | 254 | -- | -- |
| 67.76 | 0.383 | 9.23 | -0.87 | 0.353 | -1.5 | -- | -- | 0.35 | 20.6 | 25 | 252 | -- | -- |
| 70.78 | 0.392 | 9.21 | -0.728 | -- | -1.54 | -- | 1.34 | 0.367 | -- | 25.02 | 120 | -- | -- |
| 103.23 | 0.476 | 9.25 | -1.1 | 0.569 | -- | 0.753 | -- | 0.222 | 2.81 | -- | -- | -- | -- |
| 105.18 | 0.48 | 9.25 | -1.12 | 0.571 | -- | -- | -- | 0.218 | 2.75 | -- | -- | -- | -- |
| 71.48 | 0.394 | 9.23 | -0.891 | -- | -1.43 | -- | -- | 0.318 | -- | 25 | 124 | -- | -- |
| 85.58 | 0.431 | 9.19 | -- | 0.388 | -1.68 | -- | -- | 0.546 | 20 | 23.04 | 257 | -- | -- |
| 124.12 | 0.521 | 9.25 | -1.1 | -- | -- | -- | -- | 0.233 | -- | -- | -- | -- | -- |
| 138.32 | 0.55 | 9.22 | -- | 0.549 | -- | -- | -- | 0.343 | 2.73 | -- | -- | -- | -- |
| 89.94 | 0.442 | 9.18 | -- | -- | -1.56 | -- | -- | 0.537 | -- | 22.77 | 133 | -- | -- |
| 155.87 | 0.583 | 9.22 | -- | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.79 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 8 | 66.20 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 10 | 66.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 14 |
| 27 | 66.44 | temperature | 25 | 270 | > th | dose dependent | sin | 22 | NA |
| 29 | 66.44 | temperature | 25 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 53 | 66.66 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 75 | 66.90 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 78 | 66.91 | temperature | 25 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 183 | 67.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 188 | 68.08 | temperature | 25 | 90 | > th | dose dependent | sin | 19 | NA |
| 239 | 68.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 255 | 68.82 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 258 | 68.82 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 557 | 70.57 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 23 |
| 603 | 70.95 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 12 |
| 663 | 71.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 665 | 71.31 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 23 |
| 707 | 71.56 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 814 | 72.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 18 |
| 866 | 72.39 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 869 | 72.40 | temperature | 30 | 270 | < th | dose independent | sin | 22 | NA |
| 888 | 72.51 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 896 | 72.55 | temperature | 30 | 270 | > th | dose independent | sin | 22 | NA |
| 897 | 72.55 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 19 |
| 910 | 72.60 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 914 | 72.61 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 6 |
| 955 | 72.78 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 23 |