Os02g0824500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Remorin.
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Os02g0824500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Remorin.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 389.97 | 0.928 | 4.78 | -2.03 | 0.72 | 2.52 | 1.84 | -7.73 | 0.479 | 3.55 | 23.41 | 1272 | -- | -- |
| 432.74 | 0.969 | 4.54 | -0.11 | 0.974 | 2.35 | 1.63 | -- | 0.957 | 4.12 | 11.91 | 2170 | -- | -- |
| 399.68 | 0.931 | 4.78 | -1.97 | 0.753 | 2.53 | -- | -7.36 | 0.459 | 3.76 | 23.32 | 1275 | -- | -- |
| 416.78 | 0.951 | 4.61 | -0.57 | 0.943 | 2.35 | -- | -- | 0.721 | 3.78 | 17.1 | 6879 | -- | -- |
| 427.5 | 0.963 | 4.77 | -1.91 | -- | 2.68 | -- | -7.15 | 0.498 | -- | 23.34 | 1232 | -- | -- |
| 533.32 | 1.08 | 4.44 | 0.744 | 0.999 | -- | 1.66 | -- | 1.42 | 3.23 | -- | -- | -- | -- |
| 542.09 | 1.09 | 4.45 | 0.711 | 1.01 | -- | -- | -- | 1.41 | 3.42 | -- | -- | -- | -- |
| 452.42 | 0.991 | 4.55 | 0.0708 | -- | 2.08 | -- | -- | 0.987 | -- | 22.16 | 1199 | -- | -- |
| 422.13 | 0.957 | 4.58 | -- | 0.9 | 1.9 | -- | -- | 0.839 | 3.64 | 18.46 | 6975 | -- | -- |
| 599.72 | 1.14 | 4.45 | 0.754 | -- | -- | -- | -- | 1.44 | -- | -- | -- | -- | -- |
| 555.43 | 1.1 | 4.46 | -- | 1.03 | -- | -- | -- | 1.33 | 3.42 | -- | -- | -- | -- |
| 452.5 | 0.991 | 4.55 | -- | -- | 2.09 | -- | -- | 0.985 | -- | 22.2 | 1202 | -- | -- |
| 614.72 | 1.16 | 4.47 | -- | -- | -- | -- | -- | 1.35 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 385.94 | wind | 7 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 2 | 385.96 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 3 | 386.32 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 9 | 388.52 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 24 | 390.56 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 9 |
| 28 | 390.86 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 42 | 391.72 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 6 |
| 51 | 392.03 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 9 |
| 65 | 392.77 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 11 |
| 111 | 394.53 | wind | 7 | 43200 | < th | dose independent | sin | 22 | NA |
| 118 | 394.95 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 133 | 395.42 | wind | 7 | 43200 | > th | dose independent | sin | 22 | NA |
| 143 | 395.80 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 152 | 396.11 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 188 | 397.31 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 209 | 398.07 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 212 | 398.09 | wind | 5 | 43200 | > th | dose dependent | sin | 20 | NA |
| 232 | 398.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 15 |
| 239 | 398.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 289 | 399.36 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 358 | 399.87 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 21 |
| 369 | 399.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 402 | 400.07 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 452 | 400.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 482 | 400.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 583 | 401.82 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 603 | 402.12 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 605 | 402.16 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 661 | 402.68 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 677 | 402.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 685 | 402.92 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 707 | 403.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 714 | 403.35 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 719 | 403.43 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 7 |
| 748 | 403.76 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 751 | 403.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 13 |
| 753 | 403.81 | radiation | 20 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 756 | 403.82 | radiation | 20 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 758 | 403.82 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 759 | 403.82 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 762 | 403.83 | radiation | 20 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 763 | 403.83 | radiation | 20 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 769 | 403.85 | radiation | 20 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 825 | 404.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 873 | 404.62 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 910 | 404.87 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 956 | 405.26 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 3 |
| 958 | 405.29 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 9 |