BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0824500 Os02g0824500|AK111296
(179 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23750.1 | chr5:8010004-8011453 REVERSE LENGTH=203 134 2e-32
AT3G61260.1 | chr3:22675403-22676701 REVERSE LENGTH=213 122 1e-28
AT3G48940.1 | chr3:18142863-18144163 REVERSE LENGTH=176 120 5e-28
AT2G45820.1 | chr2:18863147-18864576 REVERSE LENGTH=191 115 1e-26
AT4G00670.1 | chr4:278434-279170 REVERSE LENGTH=124 63 9e-11
AT1G63295.1 | chr1:23474129-23475300 REVERSE LENGTH=152 60 9e-10
AT1G67590.1 | chr1:25333137-25334472 REVERSE LENGTH=348 52 1e-07
AT2G41870.1 | chr2:17471119-17472519 REVERSE LENGTH=275 48 3e-06
>AT5G23750.1 | chr5:8010004-8011453 REVERSE LENGTH=203
Length = 202
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 88/126 (69%)
Query: 52 GSVDRDAILANVELERKLSMIXXXXXXXXXXXXXXXXXXMSSILSWENTRKAAIEAKLRT 111
GSV+RDA+LA VE E+++S+I +SSI SWEN +KAA+EA+L+
Sbjct: 77 GSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKK 136
Query: 112 QEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRHEEIIKYEEMAAKHRSKGTTPT 171
EE+LE+KKAEY E+M+N++A IHK AEEKRA +EA R EEI+K EE+AAK+R+ GT P
Sbjct: 137 MEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPK 196
Query: 172 KFLSCF 177
K C
Sbjct: 197 KLFGCM 202
>AT3G61260.1 | chr3:22675403-22676701 REVERSE LENGTH=213
Length = 212
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 92/149 (61%)
Query: 29 GDAGAVTKTNGPSAPAGKAATPTGSVDRDAILANVELERKLSMIXXXXXXXXXXXXXXXX 88
D+ A+T P A + S+DRD LA++ E++LS +
Sbjct: 64 DDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAE 123
Query: 89 XXMSSILSWENTRKAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEAT 148
++ + +WEN++KAA+EA+L+ EE+LE+KKAEYAE+M+N+VAAIHK AEE+RA +EA
Sbjct: 124 KKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAK 183
Query: 149 RHEEIIKYEEMAAKHRSKGTTPTKFLSCF 177
R E+++K EE AAK+R+ G P CF
Sbjct: 184 RGEDVLKAEETAAKYRATGIVPKATCGCF 212
>AT3G48940.1 | chr3:18142863-18144163 REVERSE LENGTH=176
Length = 175
Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 85/127 (66%)
Query: 51 TGSVDRDAILANVELERKLSMIXXXXXXXXXXXXXXXXXXMSSILSWENTRKAAIEAKLR 110
GSV RDA+L +E ++++S+I +SS+ +WEN++KA++EA+L+
Sbjct: 49 VGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELK 108
Query: 111 TQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRHEEIIKYEEMAAKHRSKGTTP 170
EE+L +KKA Y E+M+N++A IHK AEEKRA EA R E+++K EEMAAK+R+ GT P
Sbjct: 109 KIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAP 168
Query: 171 TKFLSCF 177
TK F
Sbjct: 169 TKLFGFF 175
>AT2G45820.1 | chr2:18863147-18864576 REVERSE LENGTH=191
Length = 190
Score = 115 bits (288), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 85/127 (66%)
Query: 51 TGSVDRDAILANVELERKLSMIXXXXXXXXXXXXXXXXXXMSSILSWENTRKAAIEAKLR 110
+GS DRD ILA++E E+K S I +S + +WEN++KAA+EA+LR
Sbjct: 64 SGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLR 123
Query: 111 TQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRHEEIIKYEEMAAKHRSKGTTP 170
EEKLE+KKA+Y EKM+N+VAAIHK AEEKRA VEA + EE++K EEM AK+R+ G P
Sbjct: 124 KIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVP 183
Query: 171 TKFLSCF 177
CF
Sbjct: 184 KATCGCF 190
>AT4G00670.1 | chr4:278434-279170 REVERSE LENGTH=124
Length = 123
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 91 MSSILSWENTRKAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRH 150
+ I WE + IE++L + K++ KK E +EK+RN+ AA+H A++K+A V+ R
Sbjct: 36 LLDISGWEKKKTTKIESELARIQRKMDSKKMEKSEKLRNEKAAVHAKAQKKKADVQTRRA 95
Query: 151 EEIIKYEEMAAKHRSKGTTPTK-FLSCF 177
+EI+ EE AA+ ++ G P K LSCF
Sbjct: 96 QEILDAEEAAARFQAAGKIPKKSSLSCF 123
>AT1G63295.1 | chr1:23474129-23475300 REVERSE LENGTH=152
Length = 151
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 42 APAGKAATPTGSVDRDAILANVELERKLSMIXXXXXXXXXXXXXXXXXXMSSILSWENTR 101
+P + +T + ++ L +E E++L++I + SI SWEN
Sbjct: 13 SPLYEESTIIFASSQNEKLVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNM 72
Query: 102 KAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRHEEIIKYEEMAA 161
K A+E L+ EE L+ +K E+++K + ++ I K AE KR +E + +E IK E+++
Sbjct: 73 KTALELDLKKMEENLQVEKTEFSKKFKKKIPEIEKIAEAKREKIEKQKEQESIKVEKISE 132
Query: 162 KHRSKGTTP------TKFLSCF 177
K + TP TK CF
Sbjct: 133 KLIA---TPNAYPPNTKTCGCF 151
>AT1G67590.1 | chr1:25333137-25334472 REVERSE LENGTH=348
Length = 347
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%)
Query: 94 ILSWENTRKAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRHEEI 153
I +WEN K E +++ E K ER KA EK+ N++AA + AEE+RA EA +E+
Sbjct: 255 IQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKA 314
Query: 154 IKYEEMAAKHRSKGTTPTKFLSCF 177
+K E A R G P+ F F
Sbjct: 315 VKTSEKADYIRRSGHLPSSFSFSF 338
>AT2G41870.1 | chr2:17471119-17472519 REVERSE LENGTH=275
Length = 274
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 94 ILSWENTRKAAIEAKLRTQEEKLERKKAEYAEKMRNQVAAIHKAAEEKRATVEATRHEEI 153
I W N + + ++ E KLE +KA+ EK +N VA + AEE+RAT EA R E+
Sbjct: 189 INGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKAQRKAEERRATAEAKRGTEV 248
Query: 154 IKYEEMAAKHRSKGTTPTK--FLSC 176
K E+A R+ G P K F S
Sbjct: 249 AKVVEVANLMRALGRPPAKRSFFSF 273
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.307 0.120 0.320
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,752,474
Number of extensions: 81107
Number of successful extensions: 582
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 574
Number of HSP's successfully gapped: 12
Length of query: 179
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 87
Effective length of database: 8,584,297
Effective search space: 746833839
Effective search space used: 746833839
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 108 (46.2 bits)