Os02g0819400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Globin-like family protein.
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Os02g0819400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Globin-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.61 | 0.677 | 7.65 | -1.83 | 1.33 | 1.34 | 1.25 | 1.62 | -0.299 | 20.3 | 5.002 | 274 | -- | -- |
| 210.32 | 0.675 | 7.62 | -1.86 | 1.34 | 1.14 | 1.48 | -- | -0.297 | 20.1 | 4.968 | 313 | -- | -- |
| 212.07 | 0.678 | 7.65 | -1.85 | 1.34 | 1.35 | -- | 2.06 | -0.3 | 20.1 | 5 | 277 | -- | -- |
| 216.92 | 0.686 | 7.63 | -1.91 | 1.36 | 1.04 | -- | -- | -0.285 | 20.1 | 5 | 280 | -- | -- |
| 264.38 | 0.757 | 7.63 | -1.66 | -- | 1.88 | -- | 1.6 | -0.343 | -- | 4.1 | 391 | -- | -- |
| 232.42 | 0.715 | 7.63 | -2.15 | 1.69 | -- | 1.11 | -- | -0.29 | 19.6 | -- | -- | -- | -- |
| 235.82 | 0.719 | 7.63 | -2.18 | 1.7 | -- | -- | -- | -0.288 | 19.5 | -- | -- | -- | -- |
| 268.9 | 0.764 | 7.59 | -1.69 | -- | 1.7 | -- | -- | -0.316 | -- | 3.8 | 395 | -- | -- |
| 305.24 | 0.814 | 7.59 | -- | 1.13 | 1.41 | -- | -- | -0.112 | 20.6 | 4.359 | 284 | -- | -- |
| 390.35 | 0.923 | 7.59 | -2.2 | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
| 360.83 | 0.889 | 7.58 | -- | 1.72 | -- | -- | -- | -0.045 | 19.5 | -- | -- | -- | -- |
| 339.71 | 0.858 | 7.55 | -- | -- | 2.17 | -- | -- | -0.142 | -- | 4.007 | 416 | -- | -- |
| 518.34 | 1.06 | 7.54 | -- | -- | -- | -- | -- | -0.0694 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.75 | wind | 5 | 270 | < th | dose independent | rect. | 6 | 23 |
| 2 | 205.08 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 7 |
| 3 | 205.82 | wind | 5 | 270 | > th | dose independent | rect. | 21 | 21 |
| 13 | 206.64 | wind | 5 | 270 | > th | dose independent | rect. | 9 | 21 |
| 32 | 207.28 | wind | 5 | 270 | > th | dose independent | rect. | 12 | 23 |
| 34 | 207.32 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 13 |
| 36 | 207.33 | wind | 5 | 270 | < th | dose independent | rect. | 16 | 23 |
| 38 | 207.37 | wind | 3 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 41 | 207.43 | wind | 3 | 270 | > th | dose dependent | rect. | 23 | 20 |
| 48 | 207.51 | wind | 5 | 270 | < th | dose independent | rect. | 19 | 23 |
| 57 | 207.67 | wind | 5 | 270 | > th | dose independent | no | NA | NA |
| 64 | 207.81 | temperature | 25 | 90 | < th | dose independent | sin | 1 | NA |
| 65 | 207.83 | wind | 5 | 270 | < th | dose independent | no | NA | NA |
| 80 | 207.98 | wind | 3 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 84 | 208.08 | wind | 5 | 270 | < th | dose independent | rect. | 13 | 23 |
| 96 | 208.27 | wind | 3 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 97 | 208.29 | wind | 5 | 270 | > th | dose independent | rect. | 2 | 23 |
| 147 | 208.83 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 149 | 208.86 | wind | 5 | 270 | > th | dose independent | rect. | 15 | 23 |
| 150 | 208.86 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 169 | 209.08 | wind | 3 | 270 | > th | dose dependent | no | NA | NA |
| 171 | 209.10 | humidity | 70 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 177 | 209.15 | wind | 3 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 201 | 209.34 | temperature | 25 | 90 | > th | dose independent | sin | 1 | NA |
| 229 | 209.60 | wind | 9 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 233 | 209.64 | humidity | 70 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 266 | 209.82 | wind | 5 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 267 | 209.82 | wind | 5 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 285 | 209.97 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 4 |
| 303 | 210.07 | wind | 5 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 344 | 210.31 | humidity | 70 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 359 | 210.45 | humidity | 70 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 401 | 210.63 | wind | 3 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 408 | 210.66 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 16 |
| 420 | 210.72 | wind | 5 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 438 | 210.84 | humidity | 70 | 43200 | < th | dose dependent | sin | 5 | NA |
| 449 | 210.90 | wind | 5 | 270 | < th | dose independent | rect. | 7 | 11 |
| 457 | 210.93 | wind | 9 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 474 | 211.02 | wind | 5 | 90 | < th | dose independent | rect. | 8 | 9 |
| 483 | 211.08 | wind | 5 | 270 | < th | dose independent | rect. | 8 | 14 |
| 486 | 211.10 | wind | 5 | 270 | < th | dose independent | sin | 21 | NA |
| 538 | 211.31 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 544 | 211.33 | wind | 5 | 270 | > th | dose independent | rect. | 9 | 9 |
| 546 | 211.34 | wind | 5 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 548 | 211.34 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 555 | 211.39 | wind | 5 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 560 | 211.41 | wind | 5 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 569 | 211.45 | wind | 5 | 270 | > th | dose independent | sin | 21 | NA |
| 572 | 211.46 | wind | 5 | 270 | < th | dose independent | rect. | 1 | 23 |
| 582 | 211.51 | wind | 5 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 589 | 211.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 590 | 211.55 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 592 | 211.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 594 | 211.56 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 599 | 211.59 | wind | 5 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 627 | 211.65 | wind | 5 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 678 | 211.73 | temperature | 25 | 90 | < th | dose independent | rect. | 24 | 18 |
| 682 | 211.74 | wind | 5 | 1440 | > th | dose independent | sin | 20 | NA |
| 718 | 211.83 | wind | 5 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 728 | 211.85 | wind | 5 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 754 | 211.93 | wind | 5 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 770 | 211.98 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 819 | 212.11 | wind | 5 | 270 | < th | dose independent | rect. | 23 | 23 |
| 832 | 212.14 | wind | 5 | 1440 | < th | dose independent | rect. | 10 | 12 |
| 871 | 212.21 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 884 | 212.23 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 886 | 212.24 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 898 | 212.26 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 943 | 212.36 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 5 |