Os02g0819300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Maternal pumilio protein. Splice isoform E.
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Os02g0819300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Maternal pumilio protein. Splice isoform E.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.93 | 0.22 | 12.8 | 0.0684 | 0.232 | -0.95 | 0.552 | -0.516 | -0.0456 | 21.6 | 28.07 | 11 | -- | -- |
| 22.32 | 0.222 | 12.8 | -0.0127 | 0.235 | -0.908 | 0.429 | -- | -0.0584 | 21.1 | 28.07 | 11 | -- | -- |
| 22.87 | 0.223 | 12.8 | 0.00893 | 0.224 | -0.914 | -- | -0.242 | -0.0558 | 21 | 28.18 | 10 | -- | -- |
| 22.91 | 0.223 | 12.8 | -0.03 | 0.23 | -0.905 | -- | -- | -0.0592 | 21 | 28.2 | 11 | -- | -- |
| 23.09 | 0.224 | 12.7 | -0.0252 | -- | -1.02 | -- | -0.0868 | -0.0236 | -- | 32.88 | 313 | -- | -- |
| 34.4 | 0.275 | 12.7 | 0.19 | 0.326 | -- | 0.19 | -- | 0.133 | 17.2 | -- | -- | -- | -- |
| 34.48 | 0.275 | 12.7 | 0.19 | 0.327 | -- | -- | -- | 0.134 | 17 | -- | -- | -- | -- |
| 23.1 | 0.224 | 12.8 | -0.038 | -- | -1.05 | -- | -- | -0.0268 | -- | 33.18 | 313 | -- | -- |
| 22.93 | 0.223 | 12.8 | -- | 0.232 | -0.903 | -- | -- | -0.0574 | 20.9 | 28.2 | 10 | -- | -- |
| 40.11 | 0.296 | 12.7 | 0.178 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 35.43 | 0.278 | 12.7 | -- | 0.324 | -- | -- | -- | 0.113 | 17 | -- | -- | -- | -- |
| 23.15 | 0.224 | 12.7 | -- | -- | -1.03 | -- | -- | -0.0203 | -- | 33.19 | 305 | -- | -- |
| 40.95 | 0.299 | 12.7 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 7 | 21.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 8 | 21.99 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 11 | 22.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 13 | 22.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 16 | 22.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 18 | 22.18 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 22 | 22.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 23 | 22.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 35 | 22.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 39 | 22.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 42 | 22.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 50 | 22.53 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 51 | 22.54 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |
| 58 | 22.56 | temperature | 30 | 90 | < th | dose dependent | sin | 9 | NA |
| 62 | 22.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 63 | 22.60 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 65 | 22.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 69 | 22.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 73 | 22.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 90 | 22.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 102 | 22.75 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 110 | 22.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 112 | 22.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 145 | 22.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 195 | 22.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 209 | 22.89 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 220 | 22.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 260 | 22.93 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 261 | 22.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 272 | 22.93 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 330 | 22.98 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 332 | 22.98 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 420 | 23.03 | temperature | 15 | 1440 | > th | dose dependent | sin | 9 | NA |
| 561 | 23.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 590 | 23.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 642 | 23.15 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 643 | 23.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 888 | 23.28 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |