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Os02g0799700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.08 (0.0364) R2 : 0.723
β1 : 1.05 (0.133) R2dD : 0.0391 R2D : -0.0107
β2 : 1.98 (0.105) R2dC : 0.275 R2C : 0.425
β3 : 2.05 (0.146) R2dE : 0.152 R2E : 0.318
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.01 (0.0776) R2dN8 : 0.137 R2N8 : 0.0747
σ : 0.68
deviance : 213.21
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C
peak time of C : 19.7
E
wheather : radiation
threshold : 21.76
memory length : 5
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 16.2
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
207.08 0.676 9.08 1.09 1.94 2.02 1.66 -0.205 1.02 19.6 21.64 10 16.1 --
206.52 0.669 9.08 1.1 1.97 2.01 1.62 -- 1.01 19.6 21.37 6 16.1 --
212.69 0.679 9.1 1.04 1.93 2.06 -- 0.603 0.982 19.6 21.42 6 16.1 --
213.21 0.68 9.08 1.05 1.98 2.05 -- -- 1.01 19.7 21.76 5 16.2 --
237.32 0.717 9.03 1.13 -- 3 -- 2 1.06 -- 23.84 6 13.4 --
290.43 0.799 9.1 1.03 2.7 -- 1.76 -- 1.01 19.2 -- -- -- --
298.75 0.809 9.1 0.989 2.7 -- -- -- 1.02 19.2 -- -- -- --
241.17 0.723 9.02 1.08 -- 3.02 -- -- 1.03 -- 23.08 6 13.4 --
241.81 0.724 9.1 -- 1.98 1.98 -- -- 0.892 19.6 20 5 16.2 --
685.57 1.22 9.04 0.94 -- -- -- -- 0.97 -- -- -- -- --
324.5 0.843 9.12 -- 2.69 -- -- -- 0.907 19.2 -- -- -- --
271.16 0.767 9.03 -- -- 2.97 -- -- 0.992 -- 22.26 5 13.4 --
708.86 1.24 9.06 -- -- -- -- -- 0.866 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 207.91 radiation 20.0 10 < th dose dependent sin 22 NA
4 210.77 radiation 10.0 30 > th dose independent rect. 9 7
7 212.60 radiation 20.0 10 < th dose dependent rect. 5 15
9 213.78 temperature 20.0 270 > th dose independent rect. 13 19
24 214.47 radiation 20.0 10 < th dose independent rect. 5 15
33 216.34 radiation 10.0 10 > th dose independent sin 22 NA
36 216.95 radiation 40.0 10 < th dose dependent rect. 13 21
52 218.69 radiation 20.0 30 < th dose independent rect. 12 8
61 219.61 radiation 10.0 270 > th dose independent rect. 9 4
65 219.85 radiation 10.0 10 < th dose independent sin 22 NA
68 220.15 radiation 30.0 10 < th dose dependent rect. 13 7
70 220.23 temperature 10.0 270 > th dose dependent rect. 1 7
82 220.70 radiation 1.0 270 > th dose independent rect. 7 7
89 221.09 temperature 30.0 270 < th dose independent rect. 18 9
90 221.11 precipitation 0.1 270 < th dose independent rect. 7 7
91 221.11 precipitation 0.1 270 < th dose dependent rect. 7 7
93 221.19 humidity 60.0 270 > th dose independent rect. 18 9
94 221.24 radiation 1.0 270 < th dose independent rect. 18 9
95 221.28 temperature 15.0 270 > th dose independent rect. 3 15
97 221.34 radiation 1.0 270 < th dose dependent rect. 18 9
104 221.57 wind 7.0 270 < th dose independent rect. 18 9
111 221.84 temperature 10.0 270 > th dose independent rect. 7 7
112 221.84 atmosphere 995.0 270 > th dose independent rect. 7 7
113 221.84 atmosphere 1015.0 270 < th dose independent rect. 7 7
114 221.84 temperature 10.0 270 > th dose independent rect. 14 17
120 222.10 temperature 10.0 270 > th dose independent rect. 8 5
121 222.10 atmosphere 995.0 270 > th dose independent rect. 8 5
122 222.10 atmosphere 1015.0 270 < th dose independent rect. 8 5
123 222.10 temperature 10.0 270 > th dose independent rect. 13 19
124 222.14 wind 9.0 270 < th dose independent rect. 14 17
141 222.21 precipitation 0.1 270 < th dose independent rect. 8 5
142 222.21 precipitation 0.1 270 < th dose dependent rect. 8 5
143 222.22 wind 1.0 270 > th dose independent rect. 13 7
145 222.23 wind 9.0 270 < th dose independent rect. 7 7
148 222.39 wind 9.0 270 < th dose independent rect. 8 5
149 222.47 wind 9.0 270 < th dose independent rect. 13 19
163 222.94 temperature 10.0 270 > th dose independent rect. 18 9
169 222.94 atmosphere 1015.0 270 < th dose independent rect. 3 15
171 222.98 radiation 40.0 270 < th dose independent rect. 14 17
180 223.10 wind 9.0 270 < th dose independent rect. 3 15
186 223.30 radiation 30.0 90 < th dose independent rect. 13 20
206 223.63 atmosphere 995.0 270 > th dose independent rect. 18 9
216 223.94 precipitation 0.1 270 < th dose independent rect. 20 17
217 223.94 precipitation 0.1 270 < th dose dependent rect. 20 17
224 224.32 humidity 80.0 270 > th dose independent rect. 1 7
225 224.37 atmosphere 1015.0 270 < th dose independent rect. 13 19
226 224.39 precipitation 0.1 270 < th dose independent rect. 18 9
227 224.39 precipitation 0.1 270 < th dose dependent rect. 18 9
258 225.46 atmosphere 1010.0 270 < th dose independent rect. 13 7
265 225.56 radiation 20.0 30 < th dose independent rect. 12 22
268 225.63 wind 9.0 270 < th dose independent rect. 13 7
271 225.66 atmosphere 995.0 270 > th dose independent rect. 13 19
272 225.67 temperature 10.0 270 > th dose independent rect. 13 7
274 225.67 temperature 10.0 270 > th dose independent rect. 20 17
275 225.67 atmosphere 995.0 270 > th dose independent rect. 20 17
283 225.95 atmosphere 995.0 270 > th dose independent rect. 14 17
287 226.00 wind 9.0 270 < th dose independent rect. 20 17
301 226.32 humidity 50.0 270 > th dose dependent rect. 1 7
332 226.65 radiation 40.0 1440 < th dose dependent rect. 21 8
346 226.93 radiation 40.0 270 < th dose independent rect. 1 7
350 226.96 wind 1.0 270 > th dose independent rect. 8 5
355 226.99 temperature 10.0 270 > th dose independent rect. 1 7
357 226.99 temperature 30.0 270 < th dose independent rect. 1 7
358 226.99 humidity 50.0 270 > th dose independent rect. 1 7
360 226.99 atmosphere 995.0 270 > th dose independent rect. 1 7
361 226.99 atmosphere 1015.0 270 < th dose independent rect. 1 7
362 226.99 temperature 10.0 270 > th dose independent rect. 8 17
364 227.03 wind 9.0 270 < th dose independent rect. 1 7
380 227.26 precipitation 0.1 270 < th dose independent rect. 14 17
381 227.26 precipitation 0.1 270 < th dose dependent rect. 14 17
398 227.53 precipitation 0.1 270 < th dose independent rect. 8 17
399 227.53 precipitation 0.1 270 < th dose dependent rect. 8 17
406 227.65 precipitation 0.1 270 < th dose independent rect. 13 7
410 227.65 precipitation 0.1 270 < th dose dependent rect. 13 7
424 227.85 wind 9.0 270 < th dose independent rect. 8 17
434 227.94 precipitation 0.1 270 < th dose independent rect. 13 19
435 227.94 precipitation 0.1 270 < th dose dependent rect. 13 19
455 228.18 temperature 10.0 270 > th dose dependent rect. 13 19
464 228.30 humidity 50.0 270 > th dose independent rect. 8 5
505 228.69 atmosphere 995.0 270 > th dose independent rect. 13 7
538 229.18 wind 1.0 270 > th dose independent rect. 9 3
547 229.26 precipitation 0.1 270 < th dose independent rect. 3 15
549 229.26 precipitation 0.1 270 < th dose dependent rect. 3 15
565 229.53 radiation 40.0 90 < th dose dependent rect. 15 18
592 229.83 atmosphere 995.0 270 > th dose independent rect. 3 15
597 229.86 precipitation 0.1 270 < th dose independent rect. 1 7
599 229.86 precipitation 0.1 270 < th dose dependent rect. 1 7
728 231.00 humidity 50.0 270 > th dose independent rect. 20 17
790 231.30 humidity 50.0 90 > th dose independent rect. 15 18
812 231.44 wind 9.0 270 < th dose dependent rect. 8 5
862 231.81 temperature 10.0 1440 > th dose independent rect. 21 8
865 231.81 temperature 30.0 1440 < th dose independent rect. 21 8
869 231.81 humidity 50.0 1440 > th dose independent rect. 21 8
875 231.81 atmosphere 995.0 1440 > th dose independent rect. 21 8
876 231.81 radiation 20.0 1440 < th dose independent rect. 21 8
888 231.81 temperature 10.0 1440 > th dose independent rect. 5 16