Os02g0798100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : N-acetylglucosaminyltransferase II family protein.
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Os02g0798100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : N-acetylglucosaminyltransferase II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.57 | 0.327 | 9.61 | 1.52 | 1.12 | -1.34 | -0.509 | 1.03 | 0.428 | 5.18 | 20.27 | 12 | -- | -- |
| 49.66 | 0.328 | 9.63 | 1.4 | 1.15 | -1.23 | -0.626 | -- | 0.39 | 4.98 | 19.53 | 18 | -- | -- |
| 49.13 | 0.326 | 9.6 | 1.57 | 1.12 | -1.33 | -- | 1.32 | 0.444 | 5.18 | 20.3 | 14 | -- | -- |
| 50.84 | 0.332 | 9.63 | 1.36 | 1.14 | -1.28 | -- | -- | 0.38 | 5.13 | 19.37 | 18 | -- | -- |
| 89.71 | 0.441 | 9.59 | 1.83 | -- | -2.18 | -- | 2.21 | 0.567 | -- | 23.06 | 162 | -- | -- |
| 73.74 | 0.403 | 9.68 | 1.07 | 1.52 | -- | -0.454 | -- | 0.156 | 4.38 | -- | -- | -- | -- |
| 74.3 | 0.404 | 9.68 | 1.08 | 1.52 | -- | -- | -- | 0.159 | 4.39 | -- | -- | -- | -- |
| 95.45 | 0.455 | 9.63 | 1.5 | -- | -1.96 | -- | -- | 0.454 | -- | 23.03 | 154 | -- | -- |
| 94.84 | 0.454 | 9.68 | -- | 1.29 | -0.79 | -- | -- | 0.154 | 4.8 | 20.4 | 6 | -- | -- |
| 197.84 | 0.657 | 9.69 | 1.14 | -- | -- | -- | -- | 0.199 | -- | -- | -- | -- | -- |
| 104.97 | 0.479 | 9.71 | -- | 1.54 | -- | -- | -- | 0.0386 | 4.37 | -- | -- | -- | -- |
| 150.99 | 0.572 | 9.69 | -- | -- | -1.71 | -- | -- | 0.217 | -- | 24.1 | 153 | -- | -- |
| 232.03 | 0.711 | 9.72 | -- | -- | -- | -- | -- | 0.0726 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 22 |
| 2 | 45.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 8 | 46.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 11 | 46.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 28 | 47.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 32 | 47.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 43 | 48.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 45 | 48.31 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 53 | 48.64 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 78 | 49.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 90 | 49.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 93 | 49.38 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 106 | 49.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 107 | 49.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 116 | 49.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 125 | 49.86 | temperature | 20 | 90 | > th | dose dependent | rect. | 14 | 23 |
| 152 | 50.20 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 155 | 50.25 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 163 | 50.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 186 | 50.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 203 | 50.80 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 219 | 50.96 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 22 |
| 291 | 51.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 338 | 51.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 341 | 51.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 436 | 52.63 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 20 |
| 471 | 52.82 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 23 |
| 488 | 52.92 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 23 |
| 500 | 52.96 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 23 |
| 514 | 53.03 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 526 | 53.13 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 547 | 53.26 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 551 | 53.29 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 23 |
| 573 | 53.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 582 | 53.42 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 597 | 53.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 602 | 53.50 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 658 | 53.67 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 673 | 53.72 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 674 | 53.72 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 687 | 53.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 688 | 53.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 689 | 53.75 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 706 | 53.80 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 714 | 53.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 802 | 54.08 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 23 |
| 828 | 54.18 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 829 | 54.18 | temperature | 20 | 90 | > th | dose dependent | sin | 6 | NA |
| 848 | 54.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 14 |
| 877 | 54.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 967 | 54.53 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |