BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0798100 Os02g0798100|Os02g0798100
         (464 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0798100  N-acetylglucosaminyltransferase II family protein   825   0.0  

>Os02g0798100 N-acetylglucosaminyltransferase II family protein
          Length = 464

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/428 (92%), Positives = 396/428 (92%)

Query: 37  SRHDFVPXXXXXXXXXXXXXNNHTIAQRKILLDPDFTXXXXXXXXXXXXXXXXXXXPPRN 96
           SRHDFVP             NNHTIAQRKILLDPDFT                   PPRN
Sbjct: 37  SRHDFVPGAARAAAGVGGGGNNHTIAQRKILLDPDFTPRLPRQSALSLSLSQRNALPPRN 96

Query: 97  ADRFPRLPDGHLNIVLYVHNRPRYLRLVVDSLSRAHGIGEALLIVSHDGYFPEMDKIVQT 156
           ADRFPRLPDGHLNIVLYVHNRPRYLRLVVDSLSRAHGIGEALLIVSHDGYFPEMDKIVQT
Sbjct: 97  ADRFPRLPDGHLNIVLYVHNRPRYLRLVVDSLSRAHGIGEALLIVSHDGYFPEMDKIVQT 156

Query: 157 ITFCQVKQIFAPYSPHLFPEAFPGVSSGDCQGKDKAAEKHCQGDPDQYGNHRSPRIVSLK 216
           ITFCQVKQIFAPYSPHLFPEAFPGVSSGDCQGKDKAAEKHCQGDPDQYGNHRSPRIVSLK
Sbjct: 157 ITFCQVKQIFAPYSPHLFPEAFPGVSSGDCQGKDKAAEKHCQGDPDQYGNHRSPRIVSLK 216

Query: 217 HHWWWMMNTVWDGLDETRDFDGHILFIEEDHYIFPNAYRNAQLLVDLKPSKCPQCYAINL 276
           HHWWWMMNTVWDGLDETRDFDGHILFIEEDHYIFPNAYRNAQLLVDLKPSKCPQCYAINL
Sbjct: 217 HHWWWMMNTVWDGLDETRDFDGHILFIEEDHYIFPNAYRNAQLLVDLKPSKCPQCYAINL 276

Query: 277 APSDVKAKGEGWESLVAEKMGNIGYAFNRTVWRKIHAKAKQFCTFDEYNWDITMWATVYP 336
           APSDVKAKGEGWESLVAEKMGNIGYAFNRTVWRKIHAKAKQFCTFDEYNWDITMWATVYP
Sbjct: 277 APSDVKAKGEGWESLVAEKMGNIGYAFNRTVWRKIHAKAKQFCTFDEYNWDITMWATVYP 336

Query: 337 SFGSPVYSLRGPRRSAAHFGKCGLHQGQGLSNVCVDNGDATVQLDAIDKVPNIKANWPVH 396
           SFGSPVYSLRGPRRSAAHFGKCGLHQGQGLSNVCVDNGDATVQLDAIDKVPNIKANWPVH
Sbjct: 337 SFGSPVYSLRGPRRSAAHFGKCGLHQGQGLSNVCVDNGDATVQLDAIDKVPNIKANWPVH 396

Query: 397 IIKRQEGYQAGFKGWGGWGDKRYRHTDFGIAAALLYYCSNGSHNQDAPKWLVPVLFAMNM 456
           IIKRQEGYQAGFKGWGGWGDKRYRHTDFGIAAALLYYCSNGSHNQDAPKWLVPVLFAMNM
Sbjct: 397 IIKRQEGYQAGFKGWGGWGDKRYRHTDFGIAAALLYYCSNGSHNQDAPKWLVPVLFAMNM 456

Query: 457 KCIGGKLC 464
           KCIGGKLC
Sbjct: 457 KCIGGKLC 464



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.140    0.469 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,151,550
Number of extensions: 659569
Number of successful extensions: 1237
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1236
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 360
Effective length of database: 11,605,545
Effective search space: 4177996200
Effective search space used: 4177996200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)