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Os02g0792800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Rieske iron-sulfur protein Tic55 precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0183) R2 : 0.318
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.644 (0.0442) R2dC : 0.318 R2C : 0.318
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00576 (0.0385) R2dN8 : 4.32e-05 R2N8 : -0.000237
σ : 0.345
deviance : 54.51
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C
peak time of C : 1.61
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.5 0.259 13.6 0.789 0.676 -0.561 -0.37 -0.727 0.0999 1.73 78.75 1347 -- --
30.74 0.258 13.6 0.86 0.674 -0.597 -0.387 -- 0.113 1.72 77.9 1344 -- --
31 0.259 13.6 0.79 0.694 -0.551 -- -0.862 0.0998 1.64 78.94 1303 -- --
31.34 0.261 13.6 0.874 0.668 -0.615 -- -- 0.117 1.69 77.83 1359 -- --
46.88 0.321 13.6 0.887 -- -0.351 -- 0.0124 0.0877 -- 78.94 1303 -- --
35.46 0.279 13.6 0.816 0.63 -- -0.465 -- 0.0839 1.65 -- -- -- --
36.31 0.282 13.6 0.831 0.629 -- -- -- 0.0868 1.57 -- -- -- --
46.83 0.32 13.6 0.891 -- -0.352 -- -- 0.0921 -- 77.83 1359 -- --
41 0.298 13.6 -- 0.64 -1.01 -- -- 0.0664 1.61 72.78 47520 -- --
60.55 0.364 13.6 0.856 -- -- -- -- 0.101 -- -- -- -- --
54.51 0.345 13.6 -- 0.644 -- -- -- -0.00576 1.61 -- -- -- --
66.04 0.378 13.6 -- -- -1.02 -- -- 0.0785 -- 72.1 47520 -- --
79.89 0.417 13.6 -- -- -- -- -- 0.00553 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.53 radiation 10 1440 > th dose independent rect. 17 13
2 28.64 radiation 10 1440 > th dose independent rect. 17 1
14 28.90 radiation 10 1440 > th dose independent rect. 15 3
40 29.04 humidity 80 1440 < th dose dependent rect. 17 15
43 29.10 radiation 10 1440 < th dose independent rect. 15 3
44 29.10 humidity 80 1440 < th dose dependent rect. 18 10
52 29.13 radiation 10 1440 < th dose independent rect. 15 11
54 29.14 radiation 10 1440 < th dose independent rect. 15 7
61 29.15 radiation 10 1440 < th dose independent rect. 15 5
66 29.19 radiation 10 1440 > th dose independent sin 14 NA
86 29.24 temperature 30 720 < th dose independent rect. 17 2
91 29.26 radiation 10 1440 > th dose dependent rect. 17 13
95 29.29 radiation 10 1440 < th dose independent rect. 17 1
96 29.29 humidity 80 1440 < th dose dependent sin 12 NA
99 29.31 radiation 10 1440 > th dose dependent rect. 17 1
127 29.44 temperature 30 720 < th dose independent rect. 17 10
136 29.46 radiation 10 1440 < th dose independent rect. 17 9
139 29.46 radiation 40 1440 > th dose independent rect. 14 19
171 29.51 radiation 40 1440 > th dose independent rect. 14 2
194 29.53 radiation 20 1440 < th dose dependent rect. 17 9
195 29.53 radiation 20 1440 < th dose dependent rect. 15 11
198 29.54 radiation 20 1440 < th dose dependent rect. 15 8
202 29.54 radiation 20 1440 < th dose dependent rect. 17 11
207 29.54 radiation 20 1440 < th dose dependent rect. 15 15
210 29.55 radiation 20 1440 < th dose dependent rect. 15 6
219 29.56 radiation 20 1440 < th dose dependent rect. 15 4
223 29.57 radiation 1 1440 > th dose dependent rect. 14 4
226 29.57 radiation 20 1440 < th dose dependent rect. 17 6
250 29.59 humidity 80 1440 < th dose dependent rect. 18 1
251 29.59 radiation 20 1440 < th dose dependent rect. 17 1
257 29.60 radiation 40 1440 < th dose independent rect. 14 19
261 29.60 radiation 40 1440 < th dose dependent rect. 14 12
263 29.60 radiation 40 1440 < th dose dependent rect. 14 14
264 29.61 radiation 40 1440 < th dose independent rect. 14 12
269 29.61 radiation 40 1440 < th dose dependent rect. 14 8
276 29.62 radiation 40 1440 < th dose independent rect. 14 9
278 29.62 radiation 40 1440 < th dose independent rect. 14 14
281 29.62 radiation 40 1440 < th dose dependent rect. 14 5
287 29.63 radiation 40 1440 < th dose independent rect. 14 1
381 29.68 radiation 20 1440 < th dose dependent sin 14 NA
421 29.71 wind 1 43200 > th dose dependent rect. 24 4
437 29.74 radiation 10 1440 < th dose independent sin 15 NA
440 29.74 wind 9 43200 < th dose dependent rect. 24 4
443 29.75 humidity 80 720 < th dose independent rect. 19 2
472 29.77 humidity 70 1440 > th dose independent sin 14 NA
495 29.79 humidity 80 720 > th dose independent rect. 19 2
497 29.79 humidity 50 720 > th dose dependent rect. 17 4
504 29.80 humidity 70 1440 > th dose independent rect. 14 12
505 29.80 humidity 70 1440 > th dose independent rect. 14 14
533 29.81 humidity 70 1440 > th dose independent rect. 14 6
610 29.84 radiation 1 1440 > th dose dependent sin 14 NA
633 29.86 humidity 70 1440 < th dose independent rect. 12 8
645 29.86 humidity 60 720 > th dose dependent rect. 18 1
703 29.92 humidity 70 1440 < th dose independent sin 15 NA
757 29.96 temperature 25 14400 > th dose dependent rect. 23 1
790 30.02 temperature 30 14400 > th dose independent rect. 17 1
845 30.07 humidity 70 720 > th dose independent rect. 17 3
893 30.10 temperature 30 14400 < th dose independent rect. 17 1