Os02g0791800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD-40 repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0791800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD-40 repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.09 | 0.205 | 10.2 | -0.759 | 0.617 | 0.0383 | 0.36 | 3.53 | 0.0627 | 2.22 | 29.5 | 3425 | -- | -- |
| 20.19 | 0.209 | 10.1 | -0.0881 | 0.591 | 0.464 | 0.251 | -- | 0.102 | 2.23 | 30.1 | 2103 | -- | -- |
| 19.53 | 0.206 | 10.2 | -0.731 | 0.618 | 0.023 | -- | 3.58 | 0.0735 | 2.19 | 29.61 | 3354 | -- | -- |
| 20.19 | 0.209 | 10.1 | -0.0625 | 0.598 | 0.469 | -- | -- | 0.133 | 1.84 | 30 | 2094 | -- | -- |
| 34.31 | 0.274 | 10.1 | -0.168 | -- | 0.429 | -- | 0.717 | 0.202 | -- | 29.4 | 3319 | -- | -- |
| 25.94 | 0.239 | 10.1 | -0.178 | 0.588 | -- | 0.283 | -- | 0.187 | 2.23 | -- | -- | -- | -- |
| 26.24 | 0.24 | 10.1 | -0.186 | 0.588 | -- | -- | -- | 0.185 | 2.2 | -- | -- | -- | -- |
| 33.13 | 0.269 | 10.1 | -0.0748 | -- | 0.485 | -- | -- | 0.228 | -- | 29.3 | 1780 | -- | -- |
| 20.33 | 0.21 | 10.1 | -- | 0.597 | 0.482 | -- | -- | 0.142 | 1.8 | 29.98 | 2102 | -- | -- |
| 46.86 | 0.32 | 10.1 | -0.162 | -- | -- | -- | -- | 0.2 | -- | -- | -- | -- | -- |
| 27.15 | 0.244 | 10.1 | -- | 0.585 | -- | -- | -- | 0.206 | 2.19 | -- | -- | -- | -- |
| 33.27 | 0.27 | 10.1 | -- | -- | 0.491 | -- | -- | 0.237 | -- | 29.3 | 1780 | -- | -- |
| 47.55 | 0.322 | 10.1 | -- | -- | -- | -- | -- | 0.218 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.77 | temperature | 25.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 2 | 18.77 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 3 | 18.84 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 3 |
| 19 | 18.94 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 11 |
| 23 | 19.00 | temperature | 30.0 | 720 | > th | dose independent | sin | 7 | NA |
| 28 | 19.02 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 2 |
| 32 | 19.05 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 34 | 19.10 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 39 | 19.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 41 | 19.12 | temperature | 30.0 | 720 | < th | dose independent | sin | 5 | NA |
| 92 | 19.23 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 93 | 19.23 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 101 | 19.25 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 11 |
| 104 | 19.26 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 118 | 19.27 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 144 | 19.31 | temperature | 30.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 145 | 19.31 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 169 | 19.33 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 192 | 19.34 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 213 | 19.35 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 264 | 19.38 | temperature | 30.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 272 | 19.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 280 | 19.39 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 361 | 19.41 | radiation | 30.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 374 | 19.42 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 383 | 19.44 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 407 | 19.46 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 15 |
| 450 | 19.48 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 498 | 19.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 502 | 19.49 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 533 | 19.49 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 542 | 19.50 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 650 | 19.54 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 688 | 19.56 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 805 | 19.56 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 818 | 19.57 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 819 | 19.57 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 827 | 19.58 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 857 | 19.58 | temperature | 30.0 | 720 | < th | dose independent | rect. | 20 | 16 |
| 864 | 19.58 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 888 | 19.59 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 23 |
| 889 | 19.59 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 905 | 19.59 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 924 | 19.60 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 939 | 19.61 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 954 | 19.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 976 | 19.62 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 13 | 23 |