BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0791800 Os02g0791800|AK099697
(374 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30510.1 | chr4:14905299-14906915 REVERSE LENGTH=313 320 1e-87
AT3G62770.1 | chr3:23218858-23221110 REVERSE LENGTH=426 130 1e-30
AT2G40810.1 | chr2:17032686-17034338 FORWARD LENGTH=394 117 9e-27
AT3G56440.1 | chr3:20926874-20928797 FORWARD LENGTH=392 115 4e-26
AT5G05150.1 | chr5:1524841-1526199 REVERSE LENGTH=375 95 5e-20
>AT4G30510.1 | chr4:14905299-14906915 REVERSE LENGTH=313
Length = 312
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/307 (51%), Positives = 215/307 (70%), Gaps = 4/307 (1%)
Query: 57 MYFRTNILAIVGTGEQPVLSPRCLRLIDTVAAVTKKDLNFKTSXXXXXXXXXXXXXXXQD 116
M + +++LAIVG GEQ LSPR L L T + ++LNF TS +
Sbjct: 1 MLYSSDLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLE 60
Query: 117 RTFIYDVNSTTILEEIETVPNTKGLCAFAPNSEACYLAIPASTSKGSALVYKASEPELIC 176
+TF+YD+N+ +L+ I+TVPN KGL AF+P+ E CYLA+PAST+KGS LVY + +
Sbjct: 61 KTFVYDLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHS 120
Query: 177 QIDAHESPLAAMAFSSNGTYLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFG 236
+IDAH SPLAA+A SSNG Y+AT S +GT+IRV LV++ATKS+SFRRGTYPSTIYSLSFG
Sbjct: 121 EIDAHRSPLAAIALSSNGMYIATGSEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFG 180
Query: 237 PSDDLPDVLVATSSSGSLHMFFLDAARNRRNQTS-KLLGSMIPGAITRALDPANHHIIHN 295
PS LPD+L+ATSSSGS+H F L A N+R++ S LGS++P +++ ALDPA+HH++ N
Sbjct: 181 PSTQLPDILIATSSSGSIHAFSLSLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQN 240
Query: 296 VIPAGIKSCVAVHKV---ENSQNSSKLPALRTVVYIITHDGYFREYSINTTKSNESSWVL 352
+ +GI+S V K+ E + + S +LR V +IT++GYF+EY+++ NES W L
Sbjct: 241 AVSSGIRSYAVVRKIDKLEGTSSPSHFTSLRATVSVITYNGYFQEYTLSINNKNESLWTL 300
Query: 353 QRELNLL 359
+RE NL
Sbjct: 301 EREFNLF 307
>AT3G62770.1 | chr3:23218858-23221110 REVERSE LENGTH=426
Length = 425
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 156/341 (45%), Gaps = 19/341 (5%)
Query: 17 SFNQDNSLFYVGTKDGFRIFDAHTGKLHYQKNI---GGIGNMEMYFRTNILAIVGTGEQP 73
SFNQD++ F VGT GFRI + + ++++ GG+ +EM FR NILA+VG G P
Sbjct: 82 SFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVVEMLFRCNILALVGGGPDP 141
Query: 74 VLSPRCLRLIDTVAAVTKKDLNFKTSXXXXXXXXXXXXXXXQDRTFIYDVNSTTILEEIE 133
P + + D +L+F++ + + F+Y+ + ++ +IE
Sbjct: 142 QYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFSDLKLMHQIE 201
Query: 134 TVPNTKGLCAFAPNSEACYLAIPASTSKGSALV--YKASEPELICQIDAHESPLAAMAFS 191
T+ N KGLCA + + L P KG + Y + + + AH+S +A A +
Sbjct: 202 TIANPKGLCAVSQGVGSMVLVCPG-LQKGQVRIEHYASKRTKFVM---AHDSRIACFALT 257
Query: 192 SNGTYLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFGPSDDLPDVLVATSSS 251
+G LATAS KGT++R+F T RRG + IYSL+F + L +S
Sbjct: 258 QDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQW---LAVSSDK 314
Query: 252 GSLHMFFLDAARNRRNQTSKLLGSMIPGAITRALDPANHHIIHNVIPAGIKSCVAVHK-- 309
G++H+F L + + S S I T + ++ + V+P S +V +
Sbjct: 315 GTVHVFGLKVNSGSQVKDS----SRIAPDATPSSPSSSLSLFKGVLPRYFSSEWSVAQFR 370
Query: 310 -VENSQNSSKLPALRTVVYIITHDGYFREYSINTTKSNESS 349
VE +Q + + V I+ DG F + E S
Sbjct: 371 LVEGTQYIAAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMS 411
>AT2G40810.1 | chr2:17032686-17034338 FORWARD LENGTH=394
Length = 393
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 7/244 (2%)
Query: 18 FNQDNSLFYVGTKDGFRIFDAHTGKLHYQKNI--GGIGNMEMYFRTNILAIVGTGEQPVL 75
+NQD+S F GT GFRI++ K +++ + GG +EM FR+NILA+VG G
Sbjct: 37 WNQDSSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQY 96
Query: 76 SPRCLRLIDTVAAVTKKDLNFKTSXXXXXXXXXXXXXXXQDRTFIYDVNSTTILEEIETV 135
+ + D + + F++ + + ++Y+ +L +IET
Sbjct: 97 PSSKVLIWDDHQSRCISEFAFRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIETQ 156
Query: 136 PNTKGLCAFAPNSEACYLAIPASTSKGSALVYKASEPELICQIDAHESPLAAMAFSSNGT 195
N +GLC + +S LA P ++G V ++ I+AH+S +A M + +G
Sbjct: 157 ANPRGLCCLSHHSNTSVLACPG-LNRGEIRVEHFG-LNMVQIINAHDSSIACMTLTLDGL 214
Query: 196 YLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFGPSDDLPDVLVATSSSGSLH 255
LATAS KGT+IR+F T+ RRG + IYS++ P+ L +S G++H
Sbjct: 215 LLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW---LAVSSDKGTVH 271
Query: 256 MFFL 259
+F L
Sbjct: 272 IFSL 275
>AT3G56440.1 | chr3:20926874-20928797 FORWARD LENGTH=392
Length = 391
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Query: 12 QIRCASFNQDNSLFYVGTKDGFRIFDAHTGKLHYQKNI--GGIGNMEMYFRTNILAIVGT 69
++ S+NQD S F GT GFRI++ K +++ + GG +EM FR+NILA+VG
Sbjct: 35 ELVSVSWNQDYSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIVEMLFRSNILALVGG 94
Query: 70 GEQPVLSPRCLRLIDTVAAVTKKDLNFKTSXXXXXXXXXXXXXXXQDRTFIYDVNSTTIL 129
G + + D + F++ + + ++Y+ +L
Sbjct: 95 GPNSQYPSNKVLIWDDHQGRCISEFTFRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLL 154
Query: 130 EEIETVPNTKGLCAFAPNSEACYLAIPASTSKGSALVYKASEPELICQIDAHESPLAAMA 189
+IE + N +GLC + + LA P +G V ++ I+AH+S +A M
Sbjct: 155 HQIENMANPRGLCCLSHHMNTSVLACPG-IRRGEVRVEHFGL-NMVQIINAHDSNIACMT 212
Query: 190 FSSNGTYLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFGPSDDLPDVLVATS 249
+ +G LATAS KGT+IR+F T+ RRG + IYS++ P+ L +S
Sbjct: 213 LTLDGLLLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW---LAVSS 269
Query: 250 SSGSLHMFFL 259
G++H+F L
Sbjct: 270 DKGTVHIFSL 279
>AT5G05150.1 | chr5:1524841-1526199 REVERSE LENGTH=375
Length = 374
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 116/258 (44%), Gaps = 21/258 (8%)
Query: 12 QIRCASFNQDNSLFYVGTKDGFRIFDAHTGKLHYQKNIG------GIGNMEMYFRTNILA 65
++ ++NQ S F VGT GF ++ K +K+I G EM F +N+ A
Sbjct: 32 KVLSVAWNQVCSGFIVGTNHGFNVYSC---KPMIKKSISRAPHESGFKVAEMLFLSNLFA 88
Query: 66 IVGTG----EQPVLSPRCLRLIDTVAAVTKKDLNFKTSXXXXXXXXXXXXXXXQDRTFIY 121
VG G E P P + + D +L FK+ + ++Y
Sbjct: 89 FVGNGYNNSEYP---PNKVFVWDDYRNCCLSELTFKSEVIAVKLAREHVVVVLKQNIYVY 145
Query: 122 DVNSTTILEEIETVPNTKGLCAFAPNSEACYLAIPASTSKGSALVYKASEPELICQIDAH 181
N+ + IET+ N KGLC LA P G V+ +I I AH
Sbjct: 146 TFNNLKVDRVIETLMNPKGLCCVTHVESKAVLACPG-FHPGQVQVHDL-RWNVIKFIKAH 203
Query: 182 ESPLAAMAFSSNGTYLATASGKGTIIRVFLVAQATKSHSFRRGTYPSTIYSLSFGPSDDL 241
+S +A M + +G+ LATAS KGT+IR+F T FRRG + IY+++ S +L
Sbjct: 204 DSAIACMTLTLDGSLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYNVAI--SSNL 261
Query: 242 PDVLVATSSSGSLHMFFL 259
V A+S G+LH+F L
Sbjct: 262 KWV-AASSEKGTLHVFRL 278
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,414,458
Number of extensions: 287307
Number of successful extensions: 758
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 745
Number of HSP's successfully gapped: 6
Length of query: 374
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 274
Effective length of database: 8,364,969
Effective search space: 2292001506
Effective search space used: 2292001506
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)