Os02g0783700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme.
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Os02g0783700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.74 | 0.645 | 4.11 | 1.47 | 1.71 | 3.05 | 2.05 | -6.07 | 0.405 | 21.8 | 93.88 | 464 | 12.8 | -- |
| 206.57 | 0.669 | 4.1 | 1.36 | 1.73 | 3.52 | 2.09 | -- | 0.417 | 21.5 | 93.9 | 459 | 11.9 | -- |
| 204.29 | 0.666 | 4.12 | 1.39 | 1.7 | 3.11 | -- | -5.88 | 0.39 | 21.8 | 93.94 | 461 | 13 | -- |
| 220.12 | 0.691 | 4.1 | 1.35 | 1.73 | 4.15 | -- | -- | 0.397 | 21.8 | 94.76 | 448 | 12.6 | -- |
| 370.7 | 0.897 | 4.1 | 1.31 | -- | 3.27 | -- | -4.67 | 0.377 | -- | 93.6 | 416 | 12.7 | -- |
| 267.13 | 0.766 | 4.13 | 1.39 | 1.68 | -- | 2.15 | -- | 0.241 | 22.2 | -- | -- | -- | -- |
| 285.42 | 0.791 | 4.13 | 1.3 | 1.66 | -- | -- | -- | 0.234 | 22.4 | -- | -- | -- | -- |
| 384.03 | 0.913 | 4.07 | 1.21 | -- | 3.31 | -- | -- | 0.363 | -- | 93.69 | 384 | 12.7 | -- |
| 265.1 | 0.758 | 4.14 | -- | 1.68 | 3.96 | -- | -- | 0.233 | 21.9 | 94.63 | 407 | 12.6 | -- |
| 454.54 | 0.996 | 4.09 | 1.33 | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
| 329.9 | 0.85 | 4.17 | -- | 1.67 | -- | -- | -- | 0.0895 | 22.4 | -- | -- | -- | -- |
| 422.78 | 0.958 | 4.08 | -- | -- | 3.48 | -- | -- | 0.27 | -- | 93.58 | 373 | 12.5 | -- |
| 500.94 | 1.04 | 4.12 | -- | -- | -- | -- | -- | 0.0926 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.09 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 208.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 214.58 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 4 | 215.43 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 7 | 216.03 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 8 | 216.03 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 57 | 221.34 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 69 | 223.90 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 80 | 223.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 84 | 224.43 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 86 | 224.43 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 88 | 224.43 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 139 | 224.43 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 143 | 224.43 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 197 | 225.57 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 200 | 226.21 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 209 | 228.16 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 210 | 228.27 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 212 | 228.56 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 213 | 228.67 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 220 | 229.52 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 222 | 229.69 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 230 | 230.35 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 245 | 231.36 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 247 | 231.50 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 251 | 231.83 | wind | 7.0 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 256 | 231.96 | wind | 7.0 | 1440 | < th | dose independent | rect. | 14 | 4 |
| 276 | 232.73 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 278 | 232.79 | wind | 7.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 286 | 232.97 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 295 | 233.40 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 299 | 233.48 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 305 | 233.57 | temperature | 20.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 317 | 233.89 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 327 | 234.04 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 330 | 234.13 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 336 | 234.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 343 | 234.52 | temperature | 20.0 | 10 | > th | dose independent | sin | 11 | NA |
| 355 | 234.87 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 360 | 234.93 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 7 |
| 365 | 234.97 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 18 |
| 451 | 235.94 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 455 | 235.98 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 457 | 236.01 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 461 | 236.04 | wind | 7.0 | 1440 | > th | dose independent | rect. | 14 | 7 |
| 486 | 236.41 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 509 | 236.61 | humidity | 90.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 518 | 236.71 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 5 |
| 551 | 237.09 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 563 | 237.09 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 575 | 237.10 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 635 | 237.53 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 641 | 237.56 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 19 | NA |
| 652 | 237.64 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 673 | 237.85 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 14 | 4 |
| 697 | 238.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 720 | 238.24 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 723 | 238.25 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 10 |
| 744 | 238.33 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 911 | 239.04 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 959 | 239.27 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 990 | 239.46 | wind | 7.0 | 1440 | > th | dose independent | rect. | 14 | 19 |